Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 AZGP1P1-201ENST00000411909 902 ntBASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 AC004790.1-201ENST00000612686 536 ntBASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 AL109936.8-201ENST00000641772 604 ntBASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 MTHFR-217ENST00000641820 1569 ntBASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.83■□□□□ 0.6
NEDD1Q8NHV4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 PIN1P1-201ENST00000412108 996 ntBASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 SPDYE18-201ENST00000510091 1050 ntBASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 AC004461.2-201ENST00000629517 803 ntBASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD1Q8NHV4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 MIR648-201ENST00000385046 94 ntBASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 AC190387.1-201ENST00000551683 408 ntBASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 AC104794.3-201ENST00000566840 1248 ntBASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 AC004233.3-201ENST00000607794 1269 ntBASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD1Q8NHV4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms