Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC013726.1-201ENST00000563747 2285 ntBASIC12.22□□□□□ -0.45
NUP35Q8NFH5 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 STARP1-201ENST00000397973 869 ntBASIC12.22□□□□□ -0.45
NUP35Q8NFH5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 TSPY7P-201ENST00000431358 1114 ntBASIC12.22□□□□□ -0.45
NUP35Q8NFH5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 MIR4492-201ENST00000581627 80 ntBASIC12.22□□□□□ -0.45
NUP35Q8NFH5 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.22□□□□□ -0.45
NUP35Q8NFH5 AL353801.3-201ENST00000609898 542 ntBASIC12.22□□□□□ -0.45
NUP35Q8NFH5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 AL590326.2-201ENST00000625139 305 ntBASIC12.22□□□□□ -0.45
NUP35Q8NFH5 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
NUP35Q8NFH5 AL592424.1-201ENST00000563624 1536 ntBASIC12.21□□□□□ -0.45
NUP35Q8NFH5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 CD70-202ENST00000423145 881 ntTSL 2 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.21□□□□□ -0.45
NUP35Q8NFH5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 AL138966.2-201ENST00000621997 464 ntBASIC12.21□□□□□ -0.45
NUP35Q8NFH5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NUP35Q8NFH5 AC148477.5-201ENST00000625164 1645 ntBASIC12.21□□□□□ -0.46
NUP35Q8NFH5 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NUP35Q8NFH5 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.21□□□□□ -0.46
NUP35Q8NFH5 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
NUP35Q8NFH5 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NUP35Q8NFH5 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NUP35Q8NFH5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
NUP35Q8NFH5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.21□□□□□ -0.46
NUP35Q8NFH5 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NUP35Q8NFH5 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.21□□□□□ -0.46
NUP35Q8NFH5 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
NUP35Q8NFH5 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NUP35Q8NFH5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NUP35Q8NFH5 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
NUP35Q8NFH5 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NUP35Q8NFH5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NUP35Q8NFH5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NUP35Q8NFH5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms