Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 MIR648-201ENST00000385046 94 ntBASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 GPX1P2-201ENST00000429271 606 ntBASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 TIMM8BP1-201ENST00000452384 211 ntBASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 ALG1L5P-201ENST00000482043 771 ntBASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 SPTSSB-204ENST00000617024 1292 ntBASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 AC079140.1-201ENST00000508039 487 ntBASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.55■□□□□ 0.08
SRFBP1Q8NEF9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.54■□□□□ 0.08
SRFBP1Q8NEF9 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms