Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 YBX1P6-201ENST00000442962 1002 ntBASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 RN7SL399P-201ENST00000471648 279 ntBASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC24.97■■□□□ 1.59
CFAP43Q8NDM7 AC006449.6-201ENST00000612330 2296 ntBASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 AL691432.1-201ENST00000596308 1422 ntBASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 MIR663B-201ENST00000408361 115 ntBASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 AL355864.2-201ENST00000447420 863 ntBASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 RPL13AP20-201ENST00000459725 609 ntBASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 AC010328.2-201ENST00000597698 1111 ntBASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 BNIP3P1-202ENST00000550043 1585 ntBASIC24.96■■□□□ 1.59
CFAP43Q8NDM7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC24.95■■□□□ 1.59
CFAP43Q8NDM7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 PTP4A1P2-201ENST00000546033 454 ntBASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 ABBA01031663.1-201ENST00000635630 790 ntBASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 INTS4P2-202ENST00000614726 2019 ntBASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC24.95■■□□□ 1.58
CFAP43Q8NDM7 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 AC079316.1-201ENST00000548397 411 ntBASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 AC004987.2-201ENST00000395959 1148 ntBASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 TARDBPP1-201ENST00000442013 1203 ntBASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms