Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC116Q8IYX3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 AC010491.1-201ENST00000563101 2797 ntBASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 MTDHP5-201ENST00000598980 586 ntBASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC116Q8IYX3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 AL355306.1-201ENST00000415580 579 ntBASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 AL135744.1-201ENST00000565098 629 ntBASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 AL603832.2-201ENST00000566195 2125 ntBASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 C20orf181-201ENST00000623918 480 ntBASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 AKAP8P1-201ENST00000434743 1349 ntBASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC116Q8IYX3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms