Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 AL135744.1-201ENST00000565098 629 ntBASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 AC008267.7-201ENST00000624570 1194 ntBASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 AC068587.6-202ENST00000641839 5619 ntBASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF440Q8IYI8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 AC063926.3-201ENST00000624734 5658 ntBASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 AL022342.1-201ENST00000400363 863 ntBASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 AC023274.1-201ENST00000418278 595 ntBASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 AC004832.2-201ENST00000426397 482 ntBASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 SPTSSB-204ENST00000617024 1292 ntBASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ZNF440Q8IYI8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 AC112504.1-201ENST00000623415 1841 ntBASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 MIR940-201ENST00000401276 94 ntBASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 MTDHP5-201ENST00000598980 586 ntBASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF440Q8IYI8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms