Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC061975.2-201ENST00000581722 295 ntBASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 AL365330.1-201ENST00000607459 531 ntBASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 AL391005.1-201ENST00000623953 2435 ntBASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 AL035633.1-201ENST00000406139 838 ntBASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 AC109322.1-201ENST00000524499 1264 ntBASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 AC024267.1-201ENST00000582320 895 ntBASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 LINC00628-201ENST00000628516 1289 ntBASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 TNRC18P3-201ENST00000441896 2691 ntBASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCUBE3Q8IX30 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 AC018695.7-201ENST00000624587 2492 ntBASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 PCDHA1-201ENST00000378133 2726 ntBASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 TSEN15P1-201ENST00000423257 515 ntBASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 SPDYE14P-201ENST00000442619 822 ntBASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 MIR4321-201ENST00000592276 80 ntBASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 AC011467.4-201ENST00000594891 528 ntBASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
SCUBE3Q8IX30 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCUBE3Q8IX30 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCUBE3Q8IX30 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCUBE3Q8IX30 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.08■□□□□ 0.33
SCUBE3Q8IX30 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SCUBE3Q8IX30 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms