Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CRLF3Q8IUI8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 AC006058.4-201ENST00000624016 1670 ntBASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 AC093909.1-201ENST00000504731 1122 ntBASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 AL049840.3-201ENST00000602669 611 ntBASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 MIR7706-201ENST00000613747 67 ntBASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 BX640515.1-201ENST00000617215 977 ntBASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.34■□□□□ 0.21
CRLF3Q8IUI8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CRLF3Q8IUI8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CRLF3Q8IUI8 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
CRLF3Q8IUI8 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CRLF3Q8IUI8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CRLF3Q8IUI8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CRLF3Q8IUI8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CRLF3Q8IUI8 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 MPDU1-223ENST00000582151 728 ntBASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 NKAPP1-205ENST00000585790 367 ntBASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 AL139288.1-201ENST00000623748 933 ntBASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 FAM215A-202ENST00000632077 792 ntBASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 IL9RP2-201ENST00000423948 1312 ntBASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 GPAA1P2-202ENST00000606848 1787 ntBASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.33■□□□□ 0.2
CRLF3Q8IUI8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms