Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 LINC00554-201ENST00000564841 3011 ntBASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 AL355306.1-201ENST00000415580 579 ntBASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.07■□□□□ 0.8
CHD1LQ86WJ1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 AC092902.6-201ENST00000641783 218 ntBASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 AC011477.6-201ENST00000604980 1927 ntBASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CHD1LQ86WJ1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 AKAP8P1-201ENST00000434743 1349 ntBASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CHD1LQ86WJ1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 AL671277.1-201ENST00000429656 993 ntBASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 ADH5P3-201ENST00000433842 1137 ntBASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
CHD1LQ86WJ1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms