Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LDB1Q86U70 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LDB1Q86U70 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.27■□□□□ 0.19
LDB1Q86U70 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LDB1Q86U70 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LDB1Q86U70 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LDB1Q86U70 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.26■□□□□ 0.19
LDB1Q86U70 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LDB1Q86U70 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LDB1Q86U70 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.26■□□□□ 0.19
LDB1Q86U70 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LDB1Q86U70 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LDB1Q86U70 AL355306.1-201ENST00000415580 579 ntBASIC16.26■□□□□ 0.19
LDB1Q86U70 AL671277.1-201ENST00000429656 993 ntBASIC16.26■□□□□ 0.19
LDB1Q86U70 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
LDB1Q86U70 ALG1L5P-201ENST00000482043 771 ntBASIC16.26■□□□□ 0.19
LDB1Q86U70 LINC02447-202ENST00000501888 2146 ntBASIC16.26■□□□□ 0.19
LDB1Q86U70 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.26■□□□□ 0.19
LDB1Q86U70 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.26■□□□□ 0.19
LDB1Q86U70 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
LDB1Q86U70 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.26■□□□□ 0.19
LDB1Q86U70 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.26■□□□□ 0.19
LDB1Q86U70 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.26■□□□□ 0.19
LDB1Q86U70 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDB1Q86U70 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LDB1Q86U70 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.25■□□□□ 0.19
LDB1Q86U70 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.25■□□□□ 0.19
LDB1Q86U70 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
LDB1Q86U70 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 PMS2P7-201ENST00000506558 1336 ntBASIC16.25■□□□□ 0.19
LDB1Q86U70 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 AC022188.1-201ENST00000620960 1664 ntBASIC16.25■□□□□ 0.19
LDB1Q86U70 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.25■□□□□ 0.19
LDB1Q86U70 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.25■□□□□ 0.19
LDB1Q86U70 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.25■□□□□ 0.19
LDB1Q86U70 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LDB1Q86U70 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.25■□□□□ 0.19
LDB1Q86U70 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.25■□□□□ 0.19
LDB1Q86U70 MCCD1P2-201ENST00000423228 335 ntBASIC16.25■□□□□ 0.19
LDB1Q86U70 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.25■□□□□ 0.19
LDB1Q86U70 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LDB1Q86U70 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.25■□□□□ 0.19
LDB1Q86U70 AL135744.1-201ENST00000565098 629 ntBASIC16.25■□□□□ 0.19
LDB1Q86U70 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.25■□□□□ 0.19
LDB1Q86U70 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LDB1Q86U70 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.25■□□□□ 0.19
LDB1Q86U70 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LDB1Q86U70 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.25■□□□□ 0.19
LDB1Q86U70 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LDB1Q86U70 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.25■□□□□ 0.19
LDB1Q86U70 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
LDB1Q86U70 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
LDB1Q86U70 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LDB1Q86U70 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDB1Q86U70 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LDB1Q86U70 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 AL589702.1-201ENST00000641229 1509 ntBASIC16.24■□□□□ 0.19
LDB1Q86U70 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.24■□□□□ 0.19
LDB1Q86U70 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
LDB1Q86U70 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms