Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 FO393414.2-201ENST00000405153 598 ntBASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 RN7SL692P-201ENST00000464677 288 ntBASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DCLRE1AQ6PJP8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 AL391005.1-201ENST00000623953 2435 ntBASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 AL136982.4-201ENST00000437689 1740 ntBASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 AL353779.1-201ENST00000434793 351 ntBASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 AC114501.2-201ENST00000439631 535 ntBASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 MIR6752-201ENST00000618442 71 ntBASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 CYP4F24P-201ENST00000586049 1580 ntBASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 AC007541.1-201ENST00000570282 1469 ntBASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.3■□□□□ 0.36
DCLRE1AQ6PJP8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 HLA-V-201ENST00000429037 534 ntBASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 AC245100.5-201ENST00000452108 331 ntBASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DCLRE1AQ6PJP8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms