Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC099336.1-201ENST00000417053 1171 ntBASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 FAM21FP-201ENST00000426241 1131 ntBASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 BCRP2-202ENST00000447763 634 ntBASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 FAM86LP-201ENST00000478302 853 ntBASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 BCRP6-201ENST00000510112 632 ntBASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 BCRP7-201ENST00000511549 544 ntBASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 TUBB1P2-201ENST00000422712 1306 ntBASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 TUBB1P1-201ENST00000503144 1300 ntBASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD4Q5XG99 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 RPL13P2-201ENST00000440687 659 ntBASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 PTP4A1P2-201ENST00000546033 454 ntBASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 AC243562.2-201ENST00000561247 970 ntBASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 AL359711.2-201ENST00000563105 872 ntBASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 PP12613-201ENST00000424958 2230 ntBASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD4Q5XG99 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 AZGP1P1-201ENST00000411909 902 ntBASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 FO681548.1-201ENST00000455617 1132 ntBASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 RNA5SP412-201ENST00000516234 123 ntBASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 ENPP7P5-201ENST00000541031 1031 ntBASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 BRI3BPP1-201ENST00000594224 787 ntBASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.81■□□□□ 0.12
LYSMD4Q5XG99 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms