Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 AC007064.4-201ENST00000637740 555 ntBASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDKAL1Q5VV42 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDKAL1Q5VV42 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
CDKAL1Q5VV42 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.77■□□□□ 0.43
CDKAL1Q5VV42 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CDKAL1Q5VV42 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDKAL1Q5VV42 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDKAL1Q5VV42 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDKAL1Q5VV42 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDKAL1Q5VV42 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDKAL1Q5VV42 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDKAL1Q5VV42 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDKAL1Q5VV42 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.77■□□□□ 0.43
CDKAL1Q5VV42 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CDKAL1Q5VV42 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.77■□□□□ 0.43
CDKAL1Q5VV42 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDKAL1Q5VV42 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 AC090616.6-203ENST00000579186 1945 ntBASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 AC004870.1-201ENST00000315132 882 ntBASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 AC079776.4-201ENST00000511039 504 ntBASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKAL1Q5VV42 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 AC025580.3-201ENST00000617932 1424 ntBASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 PRYP6-201ENST00000514804 343 ntBASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.75■□□□□ 0.43
CDKAL1Q5VV42 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms