Protein–RNA interactions for Protein: Q4ZHG4

FNDC1, Fibronectin type III domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1Q4ZHG4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 FAM86LP-201ENST00000478302 853 ntBASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC1Q4ZHG4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 CTBP2P5-201ENST00000454986 1264 ntBASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 MIR4525-201ENST00000580000 75 ntBASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 MIR6799-201ENST00000620297 69 ntBASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 AC099336.1-201ENST00000417053 1171 ntBASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 SOCS2P1-201ENST00000417727 557 ntBASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 PTP4A1P2-201ENST00000546033 454 ntBASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 MIR4538-201ENST00000581377 78 ntBASIC17.1■□□□□ 0.33
FNDC1Q4ZHG4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 BOLA2P3-201ENST00000404566 256 ntBASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 AC120045.2-201ENST00000567334 178 ntBASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 AL022328.1-201ENST00000610050 478 ntBASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
FNDC1Q4ZHG4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FNDC1Q4ZHG4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
FNDC1Q4ZHG4 PCDHB19P-201ENST00000570871 2371 ntBASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms