Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AL512361.1-201ENST00000554200 418 ntBASIC18.62■□□□□ 0.57
USH1GQ495M9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.62■□□□□ 0.57
USH1GQ495M9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.62■□□□□ 0.57
USH1GQ495M9 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USH1GQ495M9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.62■□□□□ 0.57
USH1GQ495M9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
USH1GQ495M9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USH1GQ495M9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.62■□□□□ 0.57
USH1GQ495M9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.62■□□□□ 0.57
USH1GQ495M9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USH1GQ495M9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USH1GQ495M9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.62■□□□□ 0.57
USH1GQ495M9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.62■□□□□ 0.57
USH1GQ495M9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USH1GQ495M9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.62■□□□□ 0.57
USH1GQ495M9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.62■□□□□ 0.57
USH1GQ495M9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.62■□□□□ 0.57
USH1GQ495M9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USH1GQ495M9 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USH1GQ495M9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.62■□□□□ 0.57
USH1GQ495M9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USH1GQ495M9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.61■□□□□ 0.57
USH1GQ495M9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
USH1GQ495M9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
USH1GQ495M9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.61■□□□□ 0.57
USH1GQ495M9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.61■□□□□ 0.57
USH1GQ495M9 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.61■□□□□ 0.57
USH1GQ495M9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.61■□□□□ 0.57
USH1GQ495M9 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.61■□□□□ 0.57
USH1GQ495M9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.61■□□□□ 0.57
USH1GQ495M9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.61■□□□□ 0.57
USH1GQ495M9 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.61■□□□□ 0.57
USH1GQ495M9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.61■□□□□ 0.57
USH1GQ495M9 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
USH1GQ495M9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.61■□□□□ 0.57
USH1GQ495M9 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.61■□□□□ 0.57
USH1GQ495M9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.61■□□□□ 0.57
USH1GQ495M9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
USH1GQ495M9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.61■□□□□ 0.57
USH1GQ495M9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USH1GQ495M9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
USH1GQ495M9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 AC092364.2-201ENST00000596710 2692 ntBASIC18.6■□□□□ 0.57
USH1GQ495M9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
USH1GQ495M9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
USH1GQ495M9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
USH1GQ495M9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.6■□□□□ 0.57
USH1GQ495M9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.6■□□□□ 0.57
USH1GQ495M9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 RN7SL618P-201ENST00000477850 296 ntBASIC18.6■□□□□ 0.57
USH1GQ495M9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.6■□□□□ 0.57
USH1GQ495M9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.6■□□□□ 0.57
USH1GQ495M9 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
USH1GQ495M9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.6■□□□□ 0.57
USH1GQ495M9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USH1GQ495M9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.59■□□□□ 0.57
USH1GQ495M9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.59■□□□□ 0.57
USH1GQ495M9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.59■□□□□ 0.57
USH1GQ495M9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.59■□□□□ 0.57
USH1GQ495M9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms