Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 AL592424.1-201ENST00000563624 1536 ntBASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 AC092658.1-201ENST00000505836 891 ntBASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 AP001094.4-201ENST00000579008 2176 ntBASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM71Q2Q1W2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.58■□□□□ 0.41
TRIM71Q2Q1W2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
TRIM71Q2Q1W2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM71Q2Q1W2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TRIM71Q2Q1W2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM71Q2Q1W2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRIM71Q2Q1W2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
TRIM71Q2Q1W2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM71Q2Q1W2 KRT8P37-201ENST00000451609 1420 ntBASIC17.58■□□□□ 0.41
TRIM71Q2Q1W2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
TRIM71Q2Q1W2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 TARDBPP1-201ENST00000442013 1203 ntBASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 AC245100.5-201ENST00000452108 331 ntBASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 POU5F1P6-201ENST00000466990 990 ntBASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 AC009053.2-201ENST00000563701 2365 ntBASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM71Q2Q1W2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 AL442647.2-201ENST00000429864 857 ntBASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 BNIP3P42-201ENST00000454982 569 ntBASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 BNIP3P29-201ENST00000598302 571 ntBASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 AC133552.6-201ENST00000613406 534 ntBASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 AC011447.5-201ENST00000616168 564 ntBASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 REXO1L6P-201ENST00000603433 1515 ntBASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms