Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 MEP1AP4-201ENST00000423244 1087 ntBASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 MYCLP2-201ENST00000449268 967 ntBASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 ELK1P1-201ENST00000485699 580 ntBASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 CTBP2P3-201ENST00000585629 1255 ntBASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 MIR6775-201ENST00000617557 69 ntBASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 AC116353.5-201ENST00000638148 1699 ntBASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CTC1Q2NKJ3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTC1Q2NKJ3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTC1Q2NKJ3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTC1Q2NKJ3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CTC1Q2NKJ3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTC1Q2NKJ3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTC1Q2NKJ3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTC1Q2NKJ3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTC1Q2NKJ3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 AL021920.2-201ENST00000624828 1351 ntBASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 TMEM14DP-201ENST00000422205 345 ntBASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 KRT223P-202ENST00000449164 1292 ntBASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 RNA5SP410-201ENST00000516285 106 ntBASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 FAM8A2P-201ENST00000528813 1142 ntBASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.33■□□□□ 0.36
CTC1Q2NKJ3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms