Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 AC104581.1-202ENST00000635932 2618 ntBASIC14.85□□□□□ -0.03
CACNA1BQ00975 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 AL161670.2-201ENST00000557650 1227 ntBASIC14.85□□□□□ -0.03
CACNA1BQ00975 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CACNA1BQ00975 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.85□□□□□ -0.03
CACNA1BQ00975 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC14.84□□□□□ -0.03
CACNA1BQ00975 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CACNA1BQ00975 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.84□□□□□ -0.03
CACNA1BQ00975 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 TUBBP5-203ENST00000508529 1334 ntBASIC14.84□□□□□ -0.03
CACNA1BQ00975 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.84□□□□□ -0.03
CACNA1BQ00975 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CACNA1BQ00975 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CACNA1BQ00975 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.84□□□□□ -0.03
CACNA1BQ00975 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CACNA1BQ00975 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CACNA1BQ00975 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.84□□□□□ -0.03
CACNA1BQ00975 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CACNA1BQ00975 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.84□□□□□ -0.03
CACNA1BQ00975 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC14.84□□□□□ -0.03
CACNA1BQ00975 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.84□□□□□ -0.03
CACNA1BQ00975 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CACNA1BQ00975 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CACNA1BQ00975 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
CACNA1BQ00975 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
CACNA1BQ00975 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CACNA1BQ00975 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CACNA1BQ00975 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CACNA1BQ00975 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CACNA1BQ00975 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CACNA1BQ00975 RN7SL846P-201ENST00000467429 292 ntBASIC14.83□□□□□ -0.03
CACNA1BQ00975 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.83□□□□□ -0.03
CACNA1BQ00975 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC14.83□□□□□ -0.03
CACNA1BQ00975 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CACNA1BQ00975 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.03
CACNA1BQ00975 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.03
CACNA1BQ00975 AC078819.1-201ENST00000547454 765 ntBASIC14.83□□□□□ -0.03
CACNA1BQ00975 AC012085.1-201ENST00000548270 765 ntBASIC14.83□□□□□ -0.03
CACNA1BQ00975 AC120045.2-201ENST00000567334 178 ntBASIC14.83□□□□□ -0.03
CACNA1BQ00975 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.83□□□□□ -0.03
CACNA1BQ00975 AC007663.3-201ENST00000609632 465 ntBASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms