Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ASIC1P78348 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ASIC1P78348 LINC02447-202ENST00000501888 2146 ntBASIC18.18■□□□□ 0.5
ASIC1P78348 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ASIC1P78348 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.18■□□□□ 0.5
ASIC1P78348 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ASIC1P78348 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ASIC1P78348 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ASIC1P78348 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ASIC1P78348 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.18■□□□□ 0.5
ASIC1P78348 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ASIC1P78348 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ASIC1P78348 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.18■□□□□ 0.5
ASIC1P78348 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ASIC1P78348 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ASIC1P78348 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.17■□□□□ 0.5
ASIC1P78348 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.17■□□□□ 0.5
ASIC1P78348 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
ASIC1P78348 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.17■□□□□ 0.5
ASIC1P78348 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 AL355306.1-201ENST00000415580 579 ntBASIC18.17■□□□□ 0.5
ASIC1P78348 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.17■□□□□ 0.5
ASIC1P78348 PGAM5P1-201ENST00000518923 814 ntBASIC18.17■□□□□ 0.5
ASIC1P78348 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 AL138918.1-201ENST00000568306 659 ntBASIC18.17■□□□□ 0.5
ASIC1P78348 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.17■□□□□ 0.5
ASIC1P78348 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.17■□□□□ 0.5
ASIC1P78348 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.17■□□□□ 0.5
ASIC1P78348 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.17■□□□□ 0.5
ASIC1P78348 AL589702.1-201ENST00000641229 1509 ntBASIC18.17■□□□□ 0.5
ASIC1P78348 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ASIC1P78348 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ASIC1P78348 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ASIC1P78348 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.16■□□□□ 0.5
ASIC1P78348 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ASIC1P78348 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
ASIC1P78348 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ASIC1P78348 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
ASIC1P78348 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ASIC1P78348 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ASIC1P78348 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ASIC1P78348 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ASIC1P78348 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.16■□□□□ 0.5
ASIC1P78348 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
ASIC1P78348 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ASIC1P78348 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
ASIC1P78348 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ASIC1P78348 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.16■□□□□ 0.5
ASIC1P78348 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.16■□□□□ 0.5
ASIC1P78348 AL671277.1-201ENST00000429656 993 ntBASIC18.16■□□□□ 0.5
ASIC1P78348 AL135744.1-201ENST00000565098 629 ntBASIC18.16■□□□□ 0.5
ASIC1P78348 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.16■□□□□ 0.5
ASIC1P78348 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.16■□□□□ 0.5
ASIC1P78348 AC092902.6-201ENST00000641783 218 ntBASIC18.16■□□□□ 0.5
ASIC1P78348 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ASIC1P78348 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ASIC1P78348 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.16■□□□□ 0.5
ASIC1P78348 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ASIC1P78348 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ASIC1P78348 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ASIC1P78348 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ASIC1P78348 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
ASIC1P78348 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ASIC1P78348 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ASIC1P78348 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ASIC1P78348 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ASIC1P78348 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ASIC1P78348 AC069224.1-201ENST00000566372 1715 ntBASIC18.15■□□□□ 0.5
ASIC1P78348 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ASIC1P78348 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ASIC1P78348 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.15■□□□□ 0.5
ASIC1P78348 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ASIC1P78348 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
ASIC1P78348 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ASIC1P78348 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ASIC1P78348 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ASIC1P78348 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.15■□□□□ 0.5
ASIC1P78348 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
ASIC1P78348 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.15■□□□□ 0.5
ASIC1P78348 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.15■□□□□ 0.5
ASIC1P78348 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.15■□□□□ 0.5
ASIC1P78348 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms