Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB11AP62491 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
RAB11AP62491 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RAB11AP62491 NSUN5P1-202ENST00000421140 1535 ntBASIC13.32□□□□□ -0.28
RAB11AP62491 NSUN5P2-203ENST00000457352 1529 ntBASIC13.32□□□□□ -0.28
RAB11AP62491 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB11AP62491 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RAB11AP62491 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB11AP62491 AL590787.1-201ENST00000568856 1315 ntBASIC13.32□□□□□ -0.28
RAB11AP62491 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB11AP62491 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB11AP62491 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB11AP62491 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB11AP62491 ST20-AS1-201ENST00000560255 4223 ntBASIC13.32□□□□□ -0.28
RAB11AP62491 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB11AP62491 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
RAB11AP62491 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB11AP62491 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB11AP62491 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RAB11AP62491 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB11AP62491 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RAB11AP62491 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB11AP62491 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RAB11AP62491 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB11AP62491 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB11AP62491 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.31□□□□□ -0.28
RAB11AP62491 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB11AP62491 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB11AP62491 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.31□□□□□ -0.28
RAB11AP62491 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB11AP62491 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 CICP13-201ENST00000422015 2789 ntBASIC13.31□□□□□ -0.28
RAB11AP62491 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB11AP62491 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB11AP62491 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RAB11AP62491 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB11AP62491 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RAB11AP62491 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB11AP62491 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RAB11AP62491 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.31□□□□□ -0.28
RAB11AP62491 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
RAB11AP62491 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.31□□□□□ -0.28
RAB11AP62491 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 BNIP3P18-201ENST00000593976 575 ntBASIC13.31□□□□□ -0.28
RAB11AP62491 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.31□□□□□ -0.28
RAB11AP62491 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB11AP62491 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 AL671710.1-201ENST00000610245 2349 ntBASIC13.31□□□□□ -0.28
RAB11AP62491 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB11AP62491 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RAB11AP62491 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB11AP62491 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB11AP62491 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 AC079776.2-201ENST00000641154 1609 ntBASIC13.31□□□□□ -0.28
RAB11AP62491 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 AC016734.2-201ENST00000624325 1377 ntBASIC13.31□□□□□ -0.28
RAB11AP62491 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB11AP62491 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB11AP62491 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB11AP62491 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB11AP62491 KRT8P39-201ENST00000396270 1433 ntBASIC13.3□□□□□ -0.28
RAB11AP62491 NCF1C-201ENST00000438382 1427 ntBASIC13.3□□□□□ -0.28
RAB11AP62491 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RAB11AP62491 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB11AP62491 LINC01144-201ENST00000626198 1710 ntBASIC13.3□□□□□ -0.28
RAB11AP62491 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB11AP62491 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB11AP62491 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB11AP62491 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB11AP62491 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB11AP62491 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB11AP62491 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB11AP62491 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms