Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3P56703 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.39■□□□□ 0.05
WNT3P56703 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.39■□□□□ 0.05
WNT3P56703 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.39■□□□□ 0.05
WNT3P56703 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.39■□□□□ 0.05
WNT3P56703 AC134684.3-201ENST00000641758 218 ntBASIC15.39■□□□□ 0.05
WNT3P56703 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.39■□□□□ 0.05
WNT3P56703 AC025580.3-201ENST00000617932 1424 ntBASIC15.39■□□□□ 0.05
WNT3P56703 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3P56703 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3P56703 AC073347.1-201ENST00000421633 2643 ntBASIC15.39■□□□□ 0.05
WNT3P56703 AC103702.1-201ENST00000548801 2630 ntBASIC15.39■□□□□ 0.05
WNT3P56703 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3P56703 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.39■□□□□ 0.05
WNT3P56703 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
WNT3P56703 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.38■□□□□ 0.05
WNT3P56703 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
WNT3P56703 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
WNT3P56703 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.38■□□□□ 0.05
WNT3P56703 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.38■□□□□ 0.05
WNT3P56703 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.38■□□□□ 0.05
WNT3P56703 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.38■□□□□ 0.05
WNT3P56703 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.38■□□□□ 0.05
WNT3P56703 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.38■□□□□ 0.05
WNT3P56703 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.38■□□□□ 0.05
WNT3P56703 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 DNAJB3-201ENST00000446806 729 ntBASIC15.38■□□□□ 0.05
WNT3P56703 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.38■□□□□ 0.05
WNT3P56703 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.38■□□□□ 0.05
WNT3P56703 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
WNT3P56703 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.38■□□□□ 0.05
WNT3P56703 AC004877.2-201ENST00000623941 599 ntBASIC15.38■□□□□ 0.05
WNT3P56703 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
WNT3P56703 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
WNT3P56703 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
WNT3P56703 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
WNT3P56703 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.38■□□□□ 0.05
WNT3P56703 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.38■□□□□ 0.05
WNT3P56703 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
WNT3P56703 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.38■□□□□ 0.05
WNT3P56703 AL589702.1-201ENST00000641229 1509 ntBASIC15.38■□□□□ 0.05
WNT3P56703 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.37■□□□□ 0.05
WNT3P56703 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
WNT3P56703 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.37■□□□□ 0.05
WNT3P56703 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.37■□□□□ 0.05
WNT3P56703 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
WNT3P56703 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.37■□□□□ 0.05
WNT3P56703 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
WNT3P56703 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.37■□□□□ 0.05
WNT3P56703 AC004967.1-201ENST00000453589 447 ntBASIC15.37■□□□□ 0.05
WNT3P56703 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.37■□□□□ 0.05
WNT3P56703 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.37■□□□□ 0.05
WNT3P56703 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.37■□□□□ 0.05
WNT3P56703 KRT19P2-202ENST00000557173 1012 ntBASIC15.37■□□□□ 0.05
WNT3P56703 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.37■□□□□ 0.05
WNT3P56703 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.37■□□□□ 0.05
WNT3P56703 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.37■□□□□ 0.05
WNT3P56703 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
WNT3P56703 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.37■□□□□ 0.05
WNT3P56703 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
WNT3P56703 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
WNT3P56703 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
WNT3P56703 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.37■□□□□ 0.05
WNT3P56703 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.37■□□□□ 0.05
WNT3P56703 CROCCP1-201ENST00000426910 5675 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms