Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VCPP55072 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.44■□□□□ 0.38
VCPP55072 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.44■□□□□ 0.38
VCPP55072 RPS2P32-201ENST00000439199 892 ntBASIC17.44■□□□□ 0.38
VCPP55072 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.44■□□□□ 0.38
VCPP55072 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.44■□□□□ 0.38
VCPP55072 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.44■□□□□ 0.38
VCPP55072 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.44■□□□□ 0.38
VCPP55072 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.44■□□□□ 0.38
VCPP55072 AL132655.2-201ENST00000596276 594 ntBASIC17.44■□□□□ 0.38
VCPP55072 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.44■□□□□ 0.38
VCPP55072 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.44■□□□□ 0.38
VCPP55072 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
VCPP55072 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.44■□□□□ 0.38
VCPP55072 AL139011.1-202ENST00000642063 584 ntBASIC17.44■□□□□ 0.38
VCPP55072 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.44■□□□□ 0.38
VCPP55072 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 SLC22A20-204ENST00000530038 1673 ntBASIC17.44■□□□□ 0.38
VCPP55072 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.44■□□□□ 0.38
VCPP55072 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VCPP55072 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VCPP55072 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.44■□□□□ 0.38
VCPP55072 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.44■□□□□ 0.38
VCPP55072 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.44■□□□□ 0.38
VCPP55072 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.44■□□□□ 0.38
VCPP55072 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.44■□□□□ 0.38
VCPP55072 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.44■□□□□ 0.38
VCPP55072 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VCPP55072 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VCPP55072 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCPP55072 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCPP55072 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VCPP55072 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCPP55072 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VCPP55072 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
VCPP55072 HMGA1P7-201ENST00000406908 502 ntBASIC17.43■□□□□ 0.38
VCPP55072 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.43■□□□□ 0.38
VCPP55072 IGHV3-62-201ENST00000520057 340 ntBASIC17.43■□□□□ 0.38
VCPP55072 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
VCPP55072 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.43■□□□□ 0.38
VCPP55072 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.43■□□□□ 0.38
VCPP55072 AC005412.3-201ENST00000580309 715 ntBASIC17.43■□□□□ 0.38
VCPP55072 MIR4515-201ENST00000584082 81 ntBASIC17.43■□□□□ 0.38
VCPP55072 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.43■□□□□ 0.38
VCPP55072 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VCPP55072 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VCPP55072 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.43■□□□□ 0.38
VCPP55072 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.43■□□□□ 0.38
VCPP55072 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VCPP55072 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
VCPP55072 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VCPP55072 AKAP8P1-201ENST00000434743 1349 ntBASIC17.43■□□□□ 0.38
VCPP55072 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
VCPP55072 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.43■□□□□ 0.38
VCPP55072 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VCPP55072 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
VCPP55072 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VCPP55072 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.42■□□□□ 0.38
VCPP55072 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.42■□□□□ 0.38
VCPP55072 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCPP55072 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.42■□□□□ 0.38
VCPP55072 AL513523.2-202ENST00000427283 2040 ntBASIC17.42■□□□□ 0.38
VCPP55072 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCPP55072 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.42■□□□□ 0.38
VCPP55072 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCPP55072 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCPP55072 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.42■□□□□ 0.38
VCPP55072 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
VCPP55072 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
VCPP55072 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.42■□□□□ 0.38
VCPP55072 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCPP55072 AL645728.2-201ENST00000641974 660 ntBASIC17.42■□□□□ 0.38
VCPP55072 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCPP55072 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VCPP55072 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
VCPP55072 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.42■□□□□ 0.38
VCPP55072 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCPP55072 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCPP55072 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCPP55072 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.42■□□□□ 0.38
VCPP55072 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VCPP55072 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
VCPP55072 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms