Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 UXT-AS1-201ENST00000590504 1525 ntBASIC17.43■□□□□ 0.38
RAD23BP54727 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAD23BP54727 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAD23BP54727 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAD23BP54727 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAD23BP54727 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAD23BP54727 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAD23BP54727 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAD23BP54727 AC005237.2-201ENST00000434368 219 ntBASIC17.43■□□□□ 0.38
RAD23BP54727 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.43■□□□□ 0.38
RAD23BP54727 SLC25A39P2-201ENST00000537614 270 ntBASIC17.43■□□□□ 0.38
RAD23BP54727 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
RAD23BP54727 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.43■□□□□ 0.38
RAD23BP54727 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.43■□□□□ 0.38
RAD23BP54727 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.43■□□□□ 0.38
RAD23BP54727 AC004835.2-201ENST00000603762 682 ntBASIC17.43■□□□□ 0.38
RAD23BP54727 AL596442.2-201ENST00000610240 980 ntBASIC17.43■□□□□ 0.38
RAD23BP54727 SPTSSB-204ENST00000617024 1292 ntBASIC17.43■□□□□ 0.38
RAD23BP54727 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RAD23BP54727 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.43■□□□□ 0.38
RAD23BP54727 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.43■□□□□ 0.38
RAD23BP54727 MTHFR-217ENST00000641820 1569 ntBASIC17.43■□□□□ 0.38
RAD23BP54727 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAD23BP54727 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.43■□□□□ 0.38
RAD23BP54727 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAD23BP54727 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAD23BP54727 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RAD23BP54727 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.43■□□□□ 0.38
RAD23BP54727 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAD23BP54727 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAD23BP54727 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RAD23BP54727 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
RAD23BP54727 AC006449.6-201ENST00000612330 2296 ntBASIC17.42■□□□□ 0.38
RAD23BP54727 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAD23BP54727 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAD23BP54727 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAD23BP54727 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RAD23BP54727 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.42■□□□□ 0.38
RAD23BP54727 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAD23BP54727 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RAD23BP54727 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.42■□□□□ 0.38
RAD23BP54727 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAD23BP54727 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAD23BP54727 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAD23BP54727 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RAD23BP54727 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
RAD23BP54727 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.42■□□□□ 0.38
RAD23BP54727 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.42■□□□□ 0.38
RAD23BP54727 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAD23BP54727 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.42■□□□□ 0.38
RAD23BP54727 RPS8P6-201ENST00000426177 609 ntBASIC17.42■□□□□ 0.38
RAD23BP54727 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.42■□□□□ 0.38
RAD23BP54727 CNN2P11-201ENST00000429351 262 ntBASIC17.42■□□□□ 0.38
RAD23BP54727 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAD23BP54727 AC098859.1-201ENST00000502915 1238 ntBASIC17.42■□□□□ 0.38
RAD23BP54727 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAD23BP54727 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.42■□□□□ 0.38
RAD23BP54727 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.42■□□□□ 0.38
RAD23BP54727 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.42■□□□□ 0.38
RAD23BP54727 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAD23BP54727 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
RAD23BP54727 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAD23BP54727 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RAD23BP54727 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.42■□□□□ 0.38
RAD23BP54727 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.42■□□□□ 0.38
RAD23BP54727 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAD23BP54727 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAD23BP54727 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.42■□□□□ 0.38
RAD23BP54727 CYP2T1P-202ENST00000641596 2535 ntBASIC17.42■□□□□ 0.38
RAD23BP54727 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAD23BP54727 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.41■□□□□ 0.38
RAD23BP54727 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 AC092850.2-201ENST00000623821 2697 ntBASIC17.41■□□□□ 0.38
RAD23BP54727 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.41■□□□□ 0.38
RAD23BP54727 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.41■□□□□ 0.38
RAD23BP54727 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.41■□□□□ 0.38
RAD23BP54727 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RAD23BP54727 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.41■□□□□ 0.38
RAD23BP54727 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RAD23BP54727 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAD23BP54727 AC027612.4-201ENST00000605371 583 ntBASIC17.41■□□□□ 0.38
RAD23BP54727 AC006538.3-201ENST00000612495 578 ntBASIC17.41■□□□□ 0.38
RAD23BP54727 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.41■□□□□ 0.38
RAD23BP54727 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
RAD23BP54727 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.41■□□□□ 0.38
RAD23BP54727 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.41■□□□□ 0.38
RAD23BP54727 TSPY26P-202ENST00000565928 3884 ntBASIC17.41■□□□□ 0.38
RAD23BP54727 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RAD23BP54727 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms