Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1A1P48729 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1A1P48729 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1A1P48729 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1A1P48729 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1A1P48729 MKNK2P1-201ENST00000437526 628 ntBASIC14.52□□□□□ -0.09
CSNK1A1P48729 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1A1P48729 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1A1P48729 AL162727.3-201ENST00000635661 2787 ntBASIC14.52□□□□□ -0.09
CSNK1A1P48729 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1A1P48729 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1A1P48729 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.52□□□□□ -0.09
CSNK1A1P48729 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 AC026691.1-201ENST00000602502 2017 ntBASIC14.51□□□□□ -0.09
CSNK1A1P48729 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 AL391005.1-201ENST00000623953 2435 ntBASIC14.51□□□□□ -0.09
CSNK1A1P48729 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 HTR5BP-201ENST00000430851 1154 ntBASIC14.51□□□□□ -0.09
CSNK1A1P48729 SPDYE11-202ENST00000450699 704 ntBASIC14.51□□□□□ -0.09
CSNK1A1P48729 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 ALG1L5P-201ENST00000482043 771 ntBASIC14.51□□□□□ -0.09
CSNK1A1P48729 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 SPDYE9P-201ENST00000570642 692 ntBASIC14.51□□□□□ -0.09
CSNK1A1P48729 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 SPDYE10P-202ENST00000612005 668 ntBASIC14.51□□□□□ -0.09
CSNK1A1P48729 SPDYE8P-202ENST00000612377 668 ntBASIC14.51□□□□□ -0.09
CSNK1A1P48729 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
CSNK1A1P48729 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1A1P48729 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 AC067930.6-201ENST00000623257 4947 ntBASIC14.5□□□□□ -0.09
CSNK1A1P48729 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.5□□□□□ -0.09
CSNK1A1P48729 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSNK1A1P48729 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms