Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TM4SF4P48230 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF4P48230 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF4P48230 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TM4SF4P48230 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF4P48230 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF4P48230 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF4P48230 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.23■□□□□ 0.51
TM4SF4P48230 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF4P48230 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.23■□□□□ 0.51
TM4SF4P48230 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM4SF4P48230 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF4P48230 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF4P48230 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.22■□□□□ 0.51
TM4SF4P48230 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF4P48230 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TM4SF4P48230 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF4P48230 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.22■□□□□ 0.51
TM4SF4P48230 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.22■□□□□ 0.51
TM4SF4P48230 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TM4SF4P48230 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF4P48230 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF4P48230 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF4P48230 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.22■□□□□ 0.51
TM4SF4P48230 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TM4SF4P48230 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.22■□□□□ 0.51
TM4SF4P48230 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TM4SF4P48230 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF4P48230 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.22■□□□□ 0.51
TM4SF4P48230 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.22■□□□□ 0.51
TM4SF4P48230 RN7SL720P-201ENST00000488178 304 ntBASIC18.22■□□□□ 0.51
TM4SF4P48230 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.22■□□□□ 0.51
TM4SF4P48230 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC18.22■□□□□ 0.51
TM4SF4P48230 AP001582.1-201ENST00000525856 295 ntBASIC18.22■□□□□ 0.51
TM4SF4P48230 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.22■□□□□ 0.51
TM4SF4P48230 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF4P48230 AC015910.1-201ENST00000579400 975 ntBASIC18.22■□□□□ 0.51
TM4SF4P48230 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF4P48230 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.22■□□□□ 0.51
TM4SF4P48230 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF4P48230 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.22■□□□□ 0.51
TM4SF4P48230 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF4P48230 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TM4SF4P48230 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF4P48230 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF4P48230 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF4P48230 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF4P48230 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF4P48230 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF4P48230 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF4P48230 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TM4SF4P48230 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF4P48230 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF4P48230 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.21■□□□□ 0.51
TM4SF4P48230 AC067852.2-201ENST00000590513 2313 ntBASIC18.21■□□□□ 0.51
TM4SF4P48230 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF4P48230 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
TM4SF4P48230 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF4P48230 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF4P48230 CYP46A4P-201ENST00000414953 267 ntBASIC18.21■□□□□ 0.51
TM4SF4P48230 AC136604.1-201ENST00000418535 575 ntBASIC18.21■□□□□ 0.51
TM4SF4P48230 PHKG1P2-201ENST00000457537 863 ntBASIC18.21■□□□□ 0.51
TM4SF4P48230 KRT18P25-201ENST00000508931 1278 ntBASIC18.21■□□□□ 0.51
TM4SF4P48230 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.21■□□□□ 0.51
TM4SF4P48230 AC245884.6-201ENST00000515672 1067 ntBASIC18.21■□□□□ 0.51
TM4SF4P48230 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.21■□□□□ 0.51
TM4SF4P48230 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.21■□□□□ 0.51
TM4SF4P48230 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.21■□□□□ 0.51
TM4SF4P48230 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18.21■□□□□ 0.51
TM4SF4P48230 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.21■□□□□ 0.51
TM4SF4P48230 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TM4SF4P48230 CU633904.3-201ENST00000624042 1029 ntBASIC18.21■□□□□ 0.51
TM4SF4P48230 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.21■□□□□ 0.51
TM4SF4P48230 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.21■□□□□ 0.51
TM4SF4P48230 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF4P48230 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.21■□□□□ 0.51
TM4SF4P48230 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
TM4SF4P48230 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TM4SF4P48230 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
TM4SF4P48230 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF4P48230 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF4P48230 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF4P48230 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.2■□□□□ 0.5
TM4SF4P48230 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF4P48230 AL121723.1-201ENST00000445194 1519 ntBASIC18.2■□□□□ 0.5
TM4SF4P48230 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF4P48230 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
TM4SF4P48230 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF4P48230 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF4P48230 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.2■□□□□ 0.5
TM4SF4P48230 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.2■□□□□ 0.5
TM4SF4P48230 AC016700.1-201ENST00000429424 312 ntBASIC18.2■□□□□ 0.5
TM4SF4P48230 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF4P48230 KRT18P43-201ENST00000469825 1281 ntBASIC18.2■□□□□ 0.5
TM4SF4P48230 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.2■□□□□ 0.5
TM4SF4P48230 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.2■□□□□ 0.5
TM4SF4P48230 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF4P48230 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF4P48230 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF4P48230 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms