Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC6A12P48065 AL592309.1-201ENST00000443127 649 ntBASIC15.67■□□□□ 0.1
SLC6A12P48065 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC6A12P48065 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC6A12P48065 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.67■□□□□ 0.1
SLC6A12P48065 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC6A12P48065 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
SLC6A12P48065 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC6A12P48065 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SLC6A12P48065 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC6A12P48065 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC6A12P48065 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC6A12P48065 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 AC046158.3-201ENST00000624947 2558 ntBASIC15.67■□□□□ 0.1
SLC6A12P48065 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
SLC6A12P48065 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC6A12P48065 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A12P48065 CICP6-201ENST00000457191 2729 ntBASIC15.67■□□□□ 0.1
SLC6A12P48065 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A12P48065 PAUPAR-201ENST00000630360 2965 ntBASIC15.66■□□□□ 0.1
SLC6A12P48065 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC6A12P48065 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC6A12P48065 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC6A12P48065 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SLC6A12P48065 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A12P48065 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A12P48065 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A12P48065 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A12P48065 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC6A12P48065 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC6A12P48065 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A12P48065 HLA-H-201ENST00000383620 1096 ntBASIC15.66■□□□□ 0.1
SLC6A12P48065 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
SLC6A12P48065 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A12P48065 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SLC6A12P48065 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SLC6A12P48065 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A12P48065 RNA5SP410-201ENST00000516285 106 ntBASIC15.66■□□□□ 0.1
SLC6A12P48065 SLC25A39P2-201ENST00000537614 270 ntBASIC15.66■□□□□ 0.1
SLC6A12P48065 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A12P48065 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.66■□□□□ 0.1
SLC6A12P48065 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC6A12P48065 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SLC6A12P48065 AL513210.1-201ENST00000629608 234 ntBASIC15.66■□□□□ 0.1
SLC6A12P48065 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A12P48065 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A12P48065 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC6A12P48065 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC6A12P48065 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A12P48065 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A12P48065 AC134407.2-201ENST00000625089 1978 ntBASIC15.66■□□□□ 0.1
SLC6A12P48065 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.65■□□□□ 0.1
SLC6A12P48065 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC6A12P48065 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 AC132872.4-202ENST00000622924 2756 ntBASIC15.65■□□□□ 0.1
SLC6A12P48065 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC6A12P48065 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SLC6A12P48065 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC6A12P48065 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
SLC6A12P48065 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC6A12P48065 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC6A12P48065 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC6A12P48065 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC6A12P48065 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC6A12P48065 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC6A12P48065 MIR4469-201ENST00000583919 79 ntBASIC15.65■□□□□ 0.1
SLC6A12P48065 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC6A12P48065 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC6A12P48065 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SLC6A12P48065 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A12P48065 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms