Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.5■□□□□ 0.23
GRIA1P42261 AL589702.1-201ENST00000641229 1509 ntBASIC16.5■□□□□ 0.23
GRIA1P42261 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GRIA1P42261 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GRIA1P42261 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GRIA1P42261 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GRIA1P42261 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GRIA1P42261 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GRIA1P42261 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.5■□□□□ 0.23
GRIA1P42261 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GRIA1P42261 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GRIA1P42261 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GRIA1P42261 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
GRIA1P42261 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GRIA1P42261 KRT18P3-201ENST00000451602 1288 ntBASIC16.5■□□□□ 0.23
GRIA1P42261 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
GRIA1P42261 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GRIA1P42261 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GRIA1P42261 WASH6P-202ENST00000359512 1437 ntBASIC16.5■□□□□ 0.23
GRIA1P42261 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.5■□□□□ 0.23
GRIA1P42261 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GRIA1P42261 AC092384.3-202ENST00000564646 2873 ntBASIC16.5■□□□□ 0.23
GRIA1P42261 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
GRIA1P42261 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
GRIA1P42261 AC144831.1-201ENST00000573312 2656 ntBASIC16.5■□□□□ 0.23
GRIA1P42261 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
GRIA1P42261 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.5■□□□□ 0.23
GRIA1P42261 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.49■□□□□ 0.23
GRIA1P42261 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
GRIA1P42261 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.49■□□□□ 0.23
GRIA1P42261 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.49■□□□□ 0.23
GRIA1P42261 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.49■□□□□ 0.23
GRIA1P42261 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
GRIA1P42261 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.49■□□□□ 0.23
GRIA1P42261 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
GRIA1P42261 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.49■□□□□ 0.23
GRIA1P42261 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GRIA1P42261 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.48■□□□□ 0.23
GRIA1P42261 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.48■□□□□ 0.23
GRIA1P42261 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
GRIA1P42261 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.48■□□□□ 0.23
GRIA1P42261 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.48■□□□□ 0.23
GRIA1P42261 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.48■□□□□ 0.23
GRIA1P42261 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
GRIA1P42261 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.48■□□□□ 0.23
GRIA1P42261 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.48■□□□□ 0.23
GRIA1P42261 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 AC026396.1-201ENST00000419388 421 ntBASIC16.48■□□□□ 0.23
GRIA1P42261 MED15P5-201ENST00000423150 992 ntBASIC16.48■□□□□ 0.23
GRIA1P42261 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.48■□□□□ 0.23
GRIA1P42261 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.48■□□□□ 0.23
GRIA1P42261 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.48■□□□□ 0.23
GRIA1P42261 AC002347.1-201ENST00000569543 541 ntBASIC16.48■□□□□ 0.23
GRIA1P42261 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.48■□□□□ 0.23
GRIA1P42261 AC027601.4-201ENST00000611259 610 ntBASIC16.48■□□□□ 0.23
GRIA1P42261 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
GRIA1P42261 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.48■□□□□ 0.23
GRIA1P42261 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
GRIA1P42261 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.48■□□□□ 0.23
GRIA1P42261 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.48■□□□□ 0.23
GRIA1P42261 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GRIA1P42261 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms