Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
TNFSF9P41273 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 MTHFR-217ENST00000641820 1569 ntBASIC17.54■□□□□ 0.4
TNFSF9P41273 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
TNFSF9P41273 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TNFSF9P41273 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TNFSF9P41273 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TNFSF9P41273 AL080243.2-201ENST00000418783 582 ntBASIC17.54■□□□□ 0.4
TNFSF9P41273 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.54■□□□□ 0.4
TNFSF9P41273 AL139010.1-201ENST00000454878 894 ntBASIC17.54■□□□□ 0.4
TNFSF9P41273 HLA-V-204ENST00000476601 1289 ntBASIC17.54■□□□□ 0.4
TNFSF9P41273 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.54■□□□□ 0.4
TNFSF9P41273 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.54■□□□□ 0.4
TNFSF9P41273 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.54■□□□□ 0.4
TNFSF9P41273 TEX28P1-201ENST00000613479 1221 ntBASIC17.54■□□□□ 0.4
TNFSF9P41273 TEX28P2-201ENST00000617764 1221 ntBASIC17.54■□□□□ 0.4
TNFSF9P41273 AL590560.3-201ENST00000623350 461 ntBASIC17.54■□□□□ 0.4
TNFSF9P41273 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFSF9P41273 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TNFSF9P41273 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF9P41273 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TNFSF9P41273 CYP4F24P-201ENST00000586049 1580 ntBASIC17.53■□□□□ 0.4
TNFSF9P41273 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF9P41273 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TNFSF9P41273 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TNFSF9P41273 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF9P41273 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
TNFSF9P41273 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF9P41273 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF9P41273 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF9P41273 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF9P41273 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.53■□□□□ 0.4
TNFSF9P41273 TSSK5P-201ENST00000423978 907 ntBASIC17.53■□□□□ 0.4
TNFSF9P41273 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.53■□□□□ 0.4
TNFSF9P41273 AC245100.5-201ENST00000452108 331 ntBASIC17.53■□□□□ 0.4
TNFSF9P41273 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.53■□□□□ 0.4
TNFSF9P41273 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF9P41273 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.53■□□□□ 0.4
TNFSF9P41273 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.53■□□□□ 0.4
TNFSF9P41273 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF9P41273 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF9P41273 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.53■□□□□ 0.4
TNFSF9P41273 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF9P41273 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF9P41273 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF9P41273 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF9P41273 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF9P41273 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.52■□□□□ 0.4
TNFSF9P41273 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.52■□□□□ 0.4
TNFSF9P41273 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.52■□□□□ 0.4
TNFSF9P41273 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.52■□□□□ 0.4
TNFSF9P41273 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TNFSF9P41273 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.52■□□□□ 0.4
TNFSF9P41273 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.52■□□□□ 0.4
TNFSF9P41273 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TNFSF9P41273 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 BCRP1-201ENST00000444246 691 ntBASIC17.52■□□□□ 0.4
TNFSF9P41273 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.52■□□□□ 0.4
TNFSF9P41273 UGT1A2P-201ENST00000454886 866 ntBASIC17.52■□□□□ 0.4
TNFSF9P41273 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.52■□□□□ 0.4
TNFSF9P41273 SPCS2P1-201ENST00000561636 679 ntBASIC17.52■□□□□ 0.4
TNFSF9P41273 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TNFSF9P41273 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.52■□□□□ 0.4
TNFSF9P41273 AC026979.3-201ENST00000607315 403 ntBASIC17.52■□□□□ 0.4
TNFSF9P41273 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 AL691432.1-201ENST00000596308 1422 ntBASIC17.52■□□□□ 0.4
TNFSF9P41273 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.52■□□□□ 0.4
TNFSF9P41273 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF9P41273 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms