Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.47□□□□□ -0.25
SNCAP37840 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.47□□□□□ -0.25
SNCAP37840 AC012615.1-201ENST00000565797 1299 ntBASIC13.47□□□□□ -0.25
SNCAP37840 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 AC010331.1-201ENST00000611423 582 ntBASIC13.47□□□□□ -0.25
SNCAP37840 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.47□□□□□ -0.25
SNCAP37840 AL590326.2-201ENST00000625139 305 ntBASIC13.47□□□□□ -0.25
SNCAP37840 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.47□□□□□ -0.25
SNCAP37840 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.47□□□□□ -0.25
SNCAP37840 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.47□□□□□ -0.25
SNCAP37840 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 AL359258.3-201ENST00000622910 2331 ntBASIC13.47□□□□□ -0.25
SNCAP37840 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.47□□□□□ -0.25
SNCAP37840 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SNCAP37840 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
SNCAP37840 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 KRT8P49-201ENST00000604166 1432 ntBASIC13.47□□□□□ -0.25
SNCAP37840 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SNCAP37840 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNCAP37840 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNCAP37840 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNCAP37840 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SNCAP37840 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.46□□□□□ -0.25
SNCAP37840 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.46□□□□□ -0.25
SNCAP37840 LINC00895-201ENST00000629028 1637 ntBASIC13.46□□□□□ -0.25
SNCAP37840 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNCAP37840 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNCAP37840 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNCAP37840 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SNCAP37840 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNCAP37840 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNCAP37840 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNCAP37840 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SNCAP37840 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNCAP37840 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNCAP37840 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNCAP37840 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
SNCAP37840 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.46□□□□□ -0.25
SNCAP37840 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.46□□□□□ -0.25
SNCAP37840 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.46□□□□□ -0.25
SNCAP37840 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.46□□□□□ -0.25
SNCAP37840 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.46□□□□□ -0.25
SNCAP37840 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.46□□□□□ -0.25
SNCAP37840 AC099336.1-202ENST00000602961 463 ntBASIC13.46□□□□□ -0.25
SNCAP37840 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.46□□□□□ -0.25
SNCAP37840 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNCAP37840 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.46□□□□□ -0.25
SNCAP37840 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNCAP37840 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNCAP37840 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SNCAP37840 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNCAP37840 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNCAP37840 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.46□□□□□ -0.26
SNCAP37840 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.46□□□□□ -0.26
SNCAP37840 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNCAP37840 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNCAP37840 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
SNCAP37840 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNCAP37840 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNCAP37840 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SNCAP37840 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
SNCAP37840 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.45□□□□□ -0.26
SNCAP37840 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.45□□□□□ -0.26
SNCAP37840 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.45□□□□□ -0.26
SNCAP37840 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.45□□□□□ -0.26
SNCAP37840 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
SNCAP37840 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.45□□□□□ -0.26
SNCAP37840 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
SNCAP37840 AP002383.4-201ENST00000442518 975 ntBASIC13.45□□□□□ -0.26
SNCAP37840 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SNCAP37840 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SNCAP37840 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.45□□□□□ -0.26
SNCAP37840 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.45□□□□□ -0.26
SNCAP37840 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SNCAP37840 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNCAP37840 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms