Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CHRNA3P32297 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.2■□□□□ 0.34
CHRNA3P32297 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA3P32297 AL513480.1-201ENST00000451731 511 ntBASIC17.2■□□□□ 0.34
CHRNA3P32297 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.2■□□□□ 0.34
CHRNA3P32297 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.2■□□□□ 0.34
CHRNA3P32297 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA3P32297 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA3P32297 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.2■□□□□ 0.34
CHRNA3P32297 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA3P32297 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRNA3P32297 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.2■□□□□ 0.34
CHRNA3P32297 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.2■□□□□ 0.34
CHRNA3P32297 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.2■□□□□ 0.34
CHRNA3P32297 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.2■□□□□ 0.34
CHRNA3P32297 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHRNA3P32297 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA3P32297 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA3P32297 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA3P32297 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA3P32297 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA3P32297 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.2■□□□□ 0.34
CHRNA3P32297 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.19■□□□□ 0.34
CHRNA3P32297 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA3P32297 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA3P32297 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.19■□□□□ 0.34
CHRNA3P32297 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.19■□□□□ 0.34
CHRNA3P32297 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA3P32297 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA3P32297 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHRNA3P32297 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA3P32297 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA3P32297 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA3P32297 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA3P32297 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CHRNA3P32297 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.19■□□□□ 0.34
CHRNA3P32297 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CHRNA3P32297 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA3P32297 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHRNA3P32297 AC074386.1-202ENST00000463561 864 ntBASIC17.19■□□□□ 0.34
CHRNA3P32297 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.19■□□□□ 0.34
CHRNA3P32297 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CHRNA3P32297 AC107918.2-201ENST00000530817 355 ntBASIC17.19■□□□□ 0.34
CHRNA3P32297 AC005829.1-201ENST00000570002 483 ntBASIC17.19■□□□□ 0.34
CHRNA3P32297 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNA3P32297 AC020765.3-201ENST00000613051 740 ntBASIC17.19■□□□□ 0.34
CHRNA3P32297 AL691403.2-201ENST00000618460 490 ntBASIC17.19■□□□□ 0.34
CHRNA3P32297 AP001350.2-201ENST00000625104 1094 ntBASIC17.19■□□□□ 0.34
CHRNA3P32297 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNA3P32297 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNA3P32297 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.19■□□□□ 0.34
CHRNA3P32297 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHRNA3P32297 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CHRNA3P32297 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA3P32297 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA3P32297 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA3P32297 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA3P32297 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA3P32297 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.19■□□□□ 0.34
CHRNA3P32297 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CHRNA3P32297 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHRNA3P32297 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNA3P32297 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA3P32297 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA3P32297 NFIC-211ENST00000641145 8399 ntBASIC17.18■□□□□ 0.34
CHRNA3P32297 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA3P32297 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA3P32297 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA3P32297 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNA3P32297 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA3P32297 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNA3P32297 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CHRNA3P32297 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRNA3P32297 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA3P32297 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRNA3P32297 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA3P32297 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRNA3P32297 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
CHRNA3P32297 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA3P32297 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA3P32297 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CHRNA3P32297 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA3P32297 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA3P32297 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA3P32297 MIR648-201ENST00000385046 94 ntBASIC17.18■□□□□ 0.34
CHRNA3P32297 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA3P32297 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNA3P32297 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
CHRNA3P32297 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.18■□□□□ 0.34
CHRNA3P32297 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.18■□□□□ 0.34
CHRNA3P32297 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CHRNA3P32297 AC087641.1-201ENST00000557561 1021 ntBASIC17.18■□□□□ 0.34
CHRNA3P32297 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
CHRNA3P32297 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.18■□□□□ 0.34
CHRNA3P32297 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.18■□□□□ 0.34
CHRNA3P32297 C20orf181-201ENST00000623918 480 ntBASIC17.18■□□□□ 0.34
CHRNA3P32297 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRNA3P32297 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA3P32297 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CHRNA3P32297 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms