Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
COL4A5P29400 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.14■□□□□ 0.66
COL4A5P29400 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC19.14■□□□□ 0.66
COL4A5P29400 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
COL4A5P29400 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL4A5P29400 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
COL4A5P29400 CHMP4BP1-201ENST00000556017 588 ntBASIC19.14■□□□□ 0.66
COL4A5P29400 AP006547.1-201ENST00000563435 692 ntBASIC19.14■□□□□ 0.66
COL4A5P29400 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL4A5P29400 AC016629.1-201ENST00000596579 586 ntBASIC19.14■□□□□ 0.66
COL4A5P29400 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.14■□□□□ 0.66
COL4A5P29400 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.14■□□□□ 0.66
COL4A5P29400 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
COL4A5P29400 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
COL4A5P29400 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.14■□□□□ 0.66
COL4A5P29400 AL133373.2-201ENST00000623187 2828 ntBASIC19.14■□□□□ 0.65
COL4A5P29400 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A5P29400 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A5P29400 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A5P29400 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A5P29400 AC105020.1-201ENST00000435356 2205 ntBASIC19.14■□□□□ 0.65
COL4A5P29400 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A5P29400 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A5P29400 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A5P29400 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A5P29400 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A5P29400 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A5P29400 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A5P29400 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
COL4A5P29400 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.14■□□□□ 0.65
COL4A5P29400 AC091804.1-201ENST00000486888 567 ntBASIC19.14■□□□□ 0.65
COL4A5P29400 RPSAP36-202ENST00000494591 1261 ntBASIC19.14■□□□□ 0.65
COL4A5P29400 AP001258.2-201ENST00000529891 490 ntBASIC19.14■□□□□ 0.65
COL4A5P29400 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.14■□□□□ 0.65
COL4A5P29400 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A5P29400 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL4A5P29400 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.14■□□□□ 0.65
COL4A5P29400 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A5P29400 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A5P29400 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A5P29400 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A5P29400 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.13■□□□□ 0.65
COL4A5P29400 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A5P29400 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
COL4A5P29400 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A5P29400 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
COL4A5P29400 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A5P29400 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A5P29400 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A5P29400 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.13■□□□□ 0.65
COL4A5P29400 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.13■□□□□ 0.65
COL4A5P29400 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
COL4A5P29400 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.13■□□□□ 0.65
COL4A5P29400 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A5P29400 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A5P29400 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
COL4A5P29400 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.13■□□□□ 0.65
COL4A5P29400 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A5P29400 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
COL4A5P29400 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A5P29400 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A5P29400 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A5P29400 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.12■□□□□ 0.65
COL4A5P29400 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A5P29400 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
COL4A5P29400 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.12■□□□□ 0.65
COL4A5P29400 MTX1P1-201ENST00000440904 838 ntBASIC19.12■□□□□ 0.65
COL4A5P29400 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
COL4A5P29400 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.12■□□□□ 0.65
COL4A5P29400 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A5P29400 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.12■□□□□ 0.65
COL4A5P29400 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.12■□□□□ 0.65
COL4A5P29400 AC079328.1-201ENST00000560358 952 ntBASIC19.12■□□□□ 0.65
COL4A5P29400 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.12■□□□□ 0.65
COL4A5P29400 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.12■□□□□ 0.65
COL4A5P29400 AL096828.3-201ENST00000615354 462 ntBASIC19.12■□□□□ 0.65
COL4A5P29400 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A5P29400 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.12■□□□□ 0.65
COL4A5P29400 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A5P29400 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A5P29400 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A5P29400 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A5P29400 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A5P29400 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A5P29400 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.12■□□□□ 0.65
COL4A5P29400 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A5P29400 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.12■□□□□ 0.65
COL4A5P29400 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A5P29400 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A5P29400 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.12■□□□□ 0.65
COL4A5P29400 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.12■□□□□ 0.65
COL4A5P29400 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.11■□□□□ 0.65
COL4A5P29400 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.11■□□□□ 0.65
COL4A5P29400 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A5P29400 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A5P29400 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.11■□□□□ 0.65
COL4A5P29400 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
COL4A5P29400 FXNP2-201ENST00000411625 547 ntBASIC19.11■□□□□ 0.65
COL4A5P29400 C2orf27AP3-201ENST00000434123 579 ntBASIC19.11■□□□□ 0.65
COL4A5P29400 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms