Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ABCD3P28288 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ABCD3P28288 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15□□□□□ -0.01
ABCD3P28288 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 MTHFR-217ENST00000641820 1569 ntBASIC15□□□□□ -0.01
ABCD3P28288 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
ABCD3P28288 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15□□□□□ -0.01
ABCD3P28288 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ABCD3P28288 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15□□□□□ -0.01
ABCD3P28288 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15□□□□□ -0.01
ABCD3P28288 AC018529.1-201ENST00000613063 361 ntBASIC15□□□□□ -0.01
ABCD3P28288 AC093028.1-201ENST00000622998 982 ntBASIC15□□□□□ -0.01
ABCD3P28288 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15□□□□□ -0.01
ABCD3P28288 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15□□□□□ -0.01
ABCD3P28288 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ABCD3P28288 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCD3P28288 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ABCD3P28288 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ABCD3P28288 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.99□□□□□ -0.01
ABCD3P28288 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCD3P28288 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
ABCD3P28288 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCD3P28288 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
ABCD3P28288 SPDYE7P-202ENST00000420373 878 ntBASIC14.99□□□□□ -0.01
ABCD3P28288 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.99□□□□□ -0.01
ABCD3P28288 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCD3P28288 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 AC069262.1-201ENST00000539058 672 ntBASIC14.99□□□□□ -0.01
ABCD3P28288 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.99□□□□□ -0.01
ABCD3P28288 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.99□□□□□ -0.01
ABCD3P28288 MIR4321-201ENST00000592276 80 ntBASIC14.99□□□□□ -0.01
ABCD3P28288 MIR6080-201ENST00000617359 66 ntBASIC14.99□□□□□ -0.01
ABCD3P28288 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.99□□□□□ -0.01
ABCD3P28288 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.99□□□□□ -0.01
ABCD3P28288 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCD3P28288 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCD3P28288 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.99□□□□□ -0.01
ABCD3P28288 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ABCD3P28288 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCD3P28288 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
ABCD3P28288 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ABCD3P28288 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.98□□□□□ -0.01
ABCD3P28288 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.98□□□□□ -0.01
ABCD3P28288 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ABCD3P28288 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.98□□□□□ -0.01
ABCD3P28288 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
ABCD3P28288 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ABCD3P28288 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ABCD3P28288 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ABCD3P28288 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.98□□□□□ -0.01
ABCD3P28288 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms