Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MMP8P22894 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MMP8P22894 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.08■□□□□ 0.33
MMP8P22894 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.08■□□□□ 0.33
MMP8P22894 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MMP8P22894 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
MMP8P22894 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
MMP8P22894 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MMP8P22894 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.08■□□□□ 0.32
MMP8P22894 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.08■□□□□ 0.32
MMP8P22894 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.08■□□□□ 0.32
MMP8P22894 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
MMP8P22894 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.08■□□□□ 0.32
MMP8P22894 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.08■□□□□ 0.32
MMP8P22894 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.08■□□□□ 0.32
MMP8P22894 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.08■□□□□ 0.32
MMP8P22894 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.08■□□□□ 0.32
MMP8P22894 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.08■□□□□ 0.32
MMP8P22894 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.08■□□□□ 0.32
MMP8P22894 AC105917.1-201ENST00000506637 2539 ntBASIC17.08■□□□□ 0.32
MMP8P22894 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
MMP8P22894 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.08■□□□□ 0.32
MMP8P22894 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
MMP8P22894 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP8P22894 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.08■□□□□ 0.32
MMP8P22894 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MMP8P22894 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MMP8P22894 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MMP8P22894 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MMP8P22894 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
MMP8P22894 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP8P22894 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.07■□□□□ 0.32
MMP8P22894 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MMP8P22894 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP8P22894 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP8P22894 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP8P22894 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP8P22894 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP8P22894 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP8P22894 HLA-H-201ENST00000383620 1096 ntBASIC17.07■□□□□ 0.32
MMP8P22894 RPSAP43-201ENST00000402237 625 ntBASIC17.07■□□□□ 0.32
MMP8P22894 BX842568.4-201ENST00000421222 227 ntBASIC17.07■□□□□ 0.32
MMP8P22894 AC112482.1-201ENST00000492080 688 ntBASIC17.07■□□□□ 0.32
MMP8P22894 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MMP8P22894 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.07■□□□□ 0.32
MMP8P22894 SLC25A39P2-201ENST00000537614 270 ntBASIC17.07■□□□□ 0.32
MMP8P22894 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.07■□□□□ 0.32
MMP8P22894 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MMP8P22894 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP8P22894 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP8P22894 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP8P22894 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP8P22894 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MMP8P22894 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.07■□□□□ 0.32
MMP8P22894 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP8P22894 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
MMP8P22894 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP8P22894 UXT-AS1-201ENST00000590504 1525 ntBASIC17.06■□□□□ 0.32
MMP8P22894 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP8P22894 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.06■□□□□ 0.32
MMP8P22894 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MMP8P22894 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.06■□□□□ 0.32
MMP8P22894 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MMP8P22894 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP8P22894 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP8P22894 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MMP8P22894 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MMP8P22894 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP8P22894 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP8P22894 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
MMP8P22894 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.06■□□□□ 0.32
MMP8P22894 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
MMP8P22894 RNA5SP410-201ENST00000516285 106 ntBASIC17.06■□□□□ 0.32
MMP8P22894 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.06■□□□□ 0.32
MMP8P22894 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.06■□□□□ 0.32
MMP8P22894 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MMP8P22894 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.06■□□□□ 0.32
MMP8P22894 AC010327.4-202ENST00000591484 748 ntBASIC17.06■□□□□ 0.32
MMP8P22894 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.06■□□□□ 0.32
MMP8P22894 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
MMP8P22894 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MMP8P22894 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.06■□□□□ 0.32
MMP8P22894 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP8P22894 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms