Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH3P22223 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.03■□□□□ 0.16
CDH3P22223 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH3P22223 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH3P22223 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH3P22223 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH3P22223 AC243562.1-201ENST00000560672 389 ntBASIC16.03■□□□□ 0.16
CDH3P22223 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.03■□□□□ 0.16
CDH3P22223 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.03■□□□□ 0.16
CDH3P22223 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH3P22223 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CDH3P22223 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH3P22223 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
CDH3P22223 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CDH3P22223 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.02■□□□□ 0.16
CDH3P22223 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CDH3P22223 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CDH3P22223 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CDH3P22223 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CDH3P22223 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH3P22223 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH3P22223 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH3P22223 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.02■□□□□ 0.16
CDH3P22223 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.02■□□□□ 0.16
CDH3P22223 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 AC004449.1-201ENST00000564240 433 ntBASIC16.02■□□□□ 0.16
CDH3P22223 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.02■□□□□ 0.16
CDH3P22223 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CDH3P22223 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH3P22223 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDH3P22223 AL671710.1-201ENST00000610245 2349 ntBASIC16.02■□□□□ 0.15
CDH3P22223 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH3P22223 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CDH3P22223 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
CDH3P22223 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH3P22223 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CDH3P22223 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH3P22223 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.02■□□□□ 0.15
CDH3P22223 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CDH3P22223 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CDH3P22223 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CDH3P22223 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CDH3P22223 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH3P22223 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDH3P22223 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH3P22223 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH3P22223 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH3P22223 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH3P22223 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH3P22223 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH3P22223 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH3P22223 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH3P22223 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH3P22223 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH3P22223 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDH3P22223 AL627223.1-201ENST00000416693 442 ntBASIC16.01■□□□□ 0.15
CDH3P22223 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH3P22223 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.01■□□□□ 0.15
CDH3P22223 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH3P22223 KRT18P34-201ENST00000488218 1270 ntBASIC16.01■□□□□ 0.15
CDH3P22223 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH3P22223 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH3P22223 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.01■□□□□ 0.15
CDH3P22223 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
CDH3P22223 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH3P22223 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.01■□□□□ 0.15
CDH3P22223 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH3P22223 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH3P22223 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH3P22223 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
CDH3P22223 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH3P22223 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CDH3P22223 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH3P22223 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH3P22223 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH3P22223 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH3P22223 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
CDH3P22223 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH3P22223 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
CDH3P22223 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms