Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.56■□□□□ 0.24
NFKB1P19838 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 HTR5BP-201ENST00000430851 1154 ntBASIC16.56■□□□□ 0.24
NFKB1P19838 SPDYE11-202ENST00000450699 704 ntBASIC16.56■□□□□ 0.24
NFKB1P19838 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.56■□□□□ 0.24
NFKB1P19838 RN7SL589P-201ENST00000481268 310 ntBASIC16.56■□□□□ 0.24
NFKB1P19838 KRT8P48-201ENST00000515599 1220 ntBASIC16.56■□□□□ 0.24
NFKB1P19838 AC105233.2-201ENST00000523697 349 ntBASIC16.56■□□□□ 0.24
NFKB1P19838 FAM86C2P-203ENST00000528684 1004 ntBASIC16.56■□□□□ 0.24
NFKB1P19838 AF228730.5-201ENST00000530288 346 ntBASIC16.56■□□□□ 0.24
NFKB1P19838 AC243562.1-201ENST00000560672 389 ntBASIC16.56■□□□□ 0.24
NFKB1P19838 SPDYE9P-201ENST00000570642 692 ntBASIC16.56■□□□□ 0.24
NFKB1P19838 AC026120.1-201ENST00000611536 926 ntBASIC16.56■□□□□ 0.24
NFKB1P19838 SPDYE10P-202ENST00000612005 668 ntBASIC16.56■□□□□ 0.24
NFKB1P19838 SPDYE8P-202ENST00000612377 668 ntBASIC16.56■□□□□ 0.24
NFKB1P19838 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.56■□□□□ 0.24
NFKB1P19838 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NFKB1P19838 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.56■□□□□ 0.24
NFKB1P19838 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.56■□□□□ 0.24
NFKB1P19838 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NFKB1P19838 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.55■□□□□ 0.24
NFKB1P19838 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NFKB1P19838 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
NFKB1P19838 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NFKB1P19838 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 AC112504.1-201ENST00000623415 1841 ntBASIC16.55■□□□□ 0.24
NFKB1P19838 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
NFKB1P19838 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NFKB1P19838 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.55■□□□□ 0.24
NFKB1P19838 MKNK2P1-201ENST00000437526 628 ntBASIC16.55■□□□□ 0.24
NFKB1P19838 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.55■□□□□ 0.24
NFKB1P19838 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.55■□□□□ 0.24
NFKB1P19838 TIMM8BP1-201ENST00000452384 211 ntBASIC16.55■□□□□ 0.24
NFKB1P19838 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.55■□□□□ 0.24
NFKB1P19838 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.55■□□□□ 0.24
NFKB1P19838 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.55■□□□□ 0.24
NFKB1P19838 AL365330.1-201ENST00000607459 531 ntBASIC16.55■□□□□ 0.24
NFKB1P19838 AC008267.7-201ENST00000624570 1194 ntBASIC16.55■□□□□ 0.24
NFKB1P19838 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.55■□□□□ 0.24
NFKB1P19838 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.55■□□□□ 0.24
NFKB1P19838 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.55■□□□□ 0.24
NFKB1P19838 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.55■□□□□ 0.24
NFKB1P19838 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.55■□□□□ 0.24
NFKB1P19838 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.55■□□□□ 0.24
NFKB1P19838 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.55■□□□□ 0.24
NFKB1P19838 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NFKB1P19838 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NFKB1P19838 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NFKB1P19838 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NFKB1P19838 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.54■□□□□ 0.24
NFKB1P19838 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NFKB1P19838 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NFKB1P19838 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NFKB1P19838 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NFKB1P19838 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.54■□□□□ 0.24
NFKB1P19838 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NFKB1P19838 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.54■□□□□ 0.24
NFKB1P19838 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.54■□□□□ 0.24
NFKB1P19838 SPCS2P4-201ENST00000436160 681 ntBASIC16.54■□□□□ 0.24
NFKB1P19838 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.54■□□□□ 0.24
NFKB1P19838 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms