Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TPM1P09493 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM1P09493 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM1P09493 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM1P09493 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TPM1P09493 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.02■□□□□ 0.48
TPM1P09493 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM1P09493 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM1P09493 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TPM1P09493 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TPM1P09493 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.02■□□□□ 0.48
TPM1P09493 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.02■□□□□ 0.48
TPM1P09493 PMS2P1-201ENST00000431037 1228 ntBASIC18.02■□□□□ 0.48
TPM1P09493 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.02■□□□□ 0.48
TPM1P09493 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.02■□□□□ 0.48
TPM1P09493 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
TPM1P09493 AC087388.1-201ENST00000571370 1112 ntBASIC18.02■□□□□ 0.48
TPM1P09493 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.02■□□□□ 0.48
TPM1P09493 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.02■□□□□ 0.48
TPM1P09493 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM1P09493 AC138894.3-201ENST00000603787 634 ntBASIC18.02■□□□□ 0.48
TPM1P09493 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TPM1P09493 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM1P09493 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
TPM1P09493 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TPM1P09493 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TPM1P09493 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.02■□□□□ 0.47
TPM1P09493 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.02■□□□□ 0.47
TPM1P09493 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TPM1P09493 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.02■□□□□ 0.47
TPM1P09493 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.02■□□□□ 0.47
TPM1P09493 AC073347.1-201ENST00000421633 2643 ntBASIC18.02■□□□□ 0.47
TPM1P09493 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TPM1P09493 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.01■□□□□ 0.47
TPM1P09493 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.01■□□□□ 0.47
TPM1P09493 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.01■□□□□ 0.47
TPM1P09493 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.01■□□□□ 0.47
TPM1P09493 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TPM1P09493 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.01■□□□□ 0.47
TPM1P09493 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TPM1P09493 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 HCG4-201ENST00000418983 998 ntBASIC18.01■□□□□ 0.47
TPM1P09493 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.01■□□□□ 0.47
TPM1P09493 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.01■□□□□ 0.47
TPM1P09493 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.01■□□□□ 0.47
TPM1P09493 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.01■□□□□ 0.47
TPM1P09493 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.01■□□□□ 0.47
TPM1P09493 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TPM1P09493 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.01■□□□□ 0.47
TPM1P09493 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 AC069148.1-201ENST00000608741 768 ntBASIC18.01■□□□□ 0.47
TPM1P09493 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TPM1P09493 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.01■□□□□ 0.47
TPM1P09493 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TPM1P09493 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.01■□□□□ 0.47
TPM1P09493 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.01■□□□□ 0.47
TPM1P09493 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.01■□□□□ 0.47
TPM1P09493 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC18.01■□□□□ 0.47
TPM1P09493 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.01■□□□□ 0.47
TPM1P09493 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM1P09493 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18■□□□□ 0.47
TPM1P09493 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TPM1P09493 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC18■□□□□ 0.47
TPM1P09493 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM1P09493 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18■□□□□ 0.47
TPM1P09493 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18■□□□□ 0.47
TPM1P09493 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM1P09493 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM1P09493 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM1P09493 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TPM1P09493 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM1P09493 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18■□□□□ 0.47
TPM1P09493 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18■□□□□ 0.47
TPM1P09493 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18■□□□□ 0.47
TPM1P09493 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18■□□□□ 0.47
TPM1P09493 AC005412.3-201ENST00000580309 715 ntBASIC18■□□□□ 0.47
TPM1P09493 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18■□□□□ 0.47
TPM1P09493 TNRC18P2-201ENST00000417666 2714 ntBASIC18■□□□□ 0.47
TPM1P09493 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TPM1P09493 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18■□□□□ 0.47
TPM1P09493 AC069224.1-201ENST00000566372 1715 ntBASIC18■□□□□ 0.47
TPM1P09493 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TPM1P09493 GOLGA8DP-202ENST00000341390 2184 ntBASIC18■□□□□ 0.47
TPM1P09493 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms