Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.86■□□□□ 0.29
CD48P09326 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.86■□□□□ 0.29
CD48P09326 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.86■□□□□ 0.29
CD48P09326 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.86■□□□□ 0.29
CD48P09326 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.86■□□□□ 0.29
CD48P09326 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CD48P09326 KRT8P48-201ENST00000515599 1220 ntBASIC16.86■□□□□ 0.29
CD48P09326 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.86■□□□□ 0.29
CD48P09326 AC243562.1-201ENST00000560672 389 ntBASIC16.86■□□□□ 0.29
CD48P09326 AC073389.1-201ENST00000595595 795 ntBASIC16.86■□□□□ 0.29
CD48P09326 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.86■□□□□ 0.29
CD48P09326 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.86■□□□□ 0.29
CD48P09326 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.86■□□□□ 0.29
CD48P09326 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CD48P09326 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD48P09326 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD48P09326 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CD48P09326 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD48P09326 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD48P09326 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD48P09326 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
CD48P09326 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD48P09326 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CD48P09326 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD48P09326 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CD48P09326 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.85■□□□□ 0.29
CD48P09326 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.85■□□□□ 0.29
CD48P09326 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.85■□□□□ 0.29
CD48P09326 AC004832.2-201ENST00000426397 482 ntBASIC16.85■□□□□ 0.29
CD48P09326 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.85■□□□□ 0.29
CD48P09326 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.85■□□□□ 0.29
CD48P09326 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CD48P09326 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.85■□□□□ 0.29
CD48P09326 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.85■□□□□ 0.29
CD48P09326 AC027307.2-201ENST00000591252 911 ntBASIC16.85■□□□□ 0.29
CD48P09326 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.85■□□□□ 0.29
CD48P09326 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD48P09326 AKAP8P1-201ENST00000434743 1349 ntBASIC16.85■□□□□ 0.29
CD48P09326 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD48P09326 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.85■□□□□ 0.29
CD48P09326 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD48P09326 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
CD48P09326 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.85■□□□□ 0.29
CD48P09326 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.85■□□□□ 0.29
CD48P09326 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD48P09326 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.85■□□□□ 0.29
CD48P09326 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
CD48P09326 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD48P09326 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.85■□□□□ 0.29
CD48P09326 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD48P09326 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CD48P09326 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.85■□□□□ 0.29
CD48P09326 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD48P09326 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD48P09326 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.84■□□□□ 0.29
CD48P09326 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.84■□□□□ 0.29
CD48P09326 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CD48P09326 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD48P09326 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD48P09326 YBX2P1-201ENST00000394192 760 ntBASIC16.84■□□□□ 0.29
CD48P09326 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.84■□□□□ 0.29
CD48P09326 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.84■□□□□ 0.29
CD48P09326 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.84■□□□□ 0.29
CD48P09326 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.84■□□□□ 0.29
CD48P09326 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.84■□□□□ 0.29
CD48P09326 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.84■□□□□ 0.29
CD48P09326 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
CD48P09326 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD48P09326 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.84■□□□□ 0.29
CD48P09326 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.84■□□□□ 0.29
CD48P09326 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD48P09326 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CD48P09326 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD48P09326 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD48P09326 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.84■□□□□ 0.29
CD48P09326 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD48P09326 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.84■□□□□ 0.29
CD48P09326 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD48P09326 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD48P09326 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.84■□□□□ 0.29
CD48P09326 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.84■□□□□ 0.29
CD48P09326 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD48P09326 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CD48P09326 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD48P09326 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CD48P09326 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD48P09326 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.84■□□□□ 0.29
CD48P09326 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms