Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MIR661-201ENST00000384842 89 ntBASIC19.47■□□□□ 0.71
CHGBP05060 MIR770-201ENST00000390219 98 ntBASIC19.47■□□□□ 0.71
CHGBP05060 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHGBP05060 AL353705.2-201ENST00000428243 662 ntBASIC19.47■□□□□ 0.71
CHGBP05060 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.47■□□□□ 0.71
CHGBP05060 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.47■□□□□ 0.71
CHGBP05060 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.47■□□□□ 0.71
CHGBP05060 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.47■□□□□ 0.71
CHGBP05060 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHGBP05060 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.47■□□□□ 0.71
CHGBP05060 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.47■□□□□ 0.71
CHGBP05060 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHGBP05060 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.47■□□□□ 0.71
CHGBP05060 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.47■□□□□ 0.71
CHGBP05060 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHGBP05060 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHGBP05060 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHGBP05060 AC026691.1-201ENST00000602502 2017 ntBASIC19.47■□□□□ 0.71
CHGBP05060 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHGBP05060 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHGBP05060 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHGBP05060 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.47■□□□□ 0.71
CHGBP05060 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.47■□□□□ 0.71
CHGBP05060 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 AL603832.2-201ENST00000566195 2125 ntBASIC19.46■□□□□ 0.71
CHGBP05060 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.46■□□□□ 0.71
CHGBP05060 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CHGBP05060 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.46■□□□□ 0.71
CHGBP05060 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CHGBP05060 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.46■□□□□ 0.71
CHGBP05060 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.46■□□□□ 0.71
CHGBP05060 AC069120.2-201ENST00000524091 540 ntBASIC19.46■□□□□ 0.71
CHGBP05060 AL079307.3-201ENST00000556114 283 ntBASIC19.46■□□□□ 0.71
CHGBP05060 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CHGBP05060 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CHGBP05060 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.46■□□□□ 0.71
CHGBP05060 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.46■□□□□ 0.71
CHGBP05060 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.46■□□□□ 0.71
CHGBP05060 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.46■□□□□ 0.71
CHGBP05060 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.46■□□□□ 0.71
CHGBP05060 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.46■□□□□ 0.71
CHGBP05060 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHGBP05060 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.45■□□□□ 0.7
CHGBP05060 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHGBP05060 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHGBP05060 BNIP3P1-202ENST00000550043 1585 ntBASIC19.45■□□□□ 0.7
CHGBP05060 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHGBP05060 AL139384.1-201ENST00000612143 3047 ntBASIC19.45■□□□□ 0.7
CHGBP05060 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.45■□□□□ 0.7
CHGBP05060 AL691432.1-201ENST00000596308 1422 ntBASIC19.45■□□□□ 0.7
CHGBP05060 AC100757.3-201ENST00000622361 1406 ntBASIC19.45■□□□□ 0.7
CHGBP05060 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHGBP05060 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHGBP05060 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHGBP05060 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CHGBP05060 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHGBP05060 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHGBP05060 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.45■□□□□ 0.7
CHGBP05060 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHGBP05060 AC093214.1-201ENST00000511688 1107 ntBASIC19.45■□□□□ 0.7
CHGBP05060 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHGBP05060 AC027369.6-201ENST00000525520 931 ntBASIC19.45■□□□□ 0.7
CHGBP05060 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHGBP05060 AC024267.1-201ENST00000582320 895 ntBASIC19.45■□□□□ 0.7
CHGBP05060 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.45■□□□□ 0.7
CHGBP05060 TEX28P1-201ENST00000613479 1221 ntBASIC19.45■□□□□ 0.7
CHGBP05060 TEX28P2-201ENST00000617764 1221 ntBASIC19.45■□□□□ 0.7
CHGBP05060 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.45■□□□□ 0.7
CHGBP05060 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHGBP05060 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHGBP05060 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHGBP05060 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.45■□□□□ 0.7
CHGBP05060 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
CHGBP05060 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHGBP05060 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHGBP05060 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.44■□□□□ 0.7
CHGBP05060 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.44■□□□□ 0.7
CHGBP05060 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.44■□□□□ 0.7
CHGBP05060 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHGBP05060 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms