Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
APOC1P02654 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
APOC1P02654 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
APOC1P02654 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 AL122018.1-201ENST00000446607 2310 ntBASIC14.47□□□□□ -0.09
APOC1P02654 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
APOC1P02654 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
APOC1P02654 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
APOC1P02654 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.47□□□□□ -0.09
APOC1P02654 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
APOC1P02654 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.47□□□□□ -0.09
APOC1P02654 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.47□□□□□ -0.09
APOC1P02654 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.47□□□□□ -0.09
APOC1P02654 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.47□□□□□ -0.09
APOC1P02654 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
APOC1P02654 AL450487.1-201ENST00000426799 995 ntBASIC14.47□□□□□ -0.09
APOC1P02654 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.47□□□□□ -0.09
APOC1P02654 AL031432.2-201ENST00000566714 459 ntBASIC14.47□□□□□ -0.09
APOC1P02654 AL928711.1-201ENST00000570165 459 ntBASIC14.47□□□□□ -0.09
APOC1P02654 MIR4751-201ENST00000578027 74 ntBASIC14.47□□□□□ -0.09
APOC1P02654 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.47□□□□□ -0.09
APOC1P02654 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 RN7SL510P-201ENST00000581311 263 ntBASIC14.47□□□□□ -0.09
APOC1P02654 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
APOC1P02654 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.47□□□□□ -0.09
APOC1P02654 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 AL161772.1-201ENST00000610494 4412 ntBASIC14.47□□□□□ -0.09
APOC1P02654 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.47□□□□□ -0.09
APOC1P02654 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
APOC1P02654 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.47□□□□□ -0.09
APOC1P02654 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
APOC1P02654 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC1P02654 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.47□□□□□ -0.09
APOC1P02654 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC1P02654 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.46□□□□□ -0.09
APOC1P02654 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.46□□□□□ -0.09
APOC1P02654 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC1P02654 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC1P02654 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.46□□□□□ -0.09
APOC1P02654 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC1P02654 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
APOC1P02654 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC1P02654 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC1P02654 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.46□□□□□ -0.09
APOC1P02654 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
APOC1P02654 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.46□□□□□ -0.09
APOC1P02654 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
APOC1P02654 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.46□□□□□ -0.09
APOC1P02654 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC1P02654 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.46□□□□□ -0.09
APOC1P02654 AC108751.1-201ENST00000490852 363 ntBASIC14.46□□□□□ -0.09
APOC1P02654 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.46□□□□□ -0.09
APOC1P02654 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.46□□□□□ -0.09
APOC1P02654 AL662844.1-201ENST00000546340 181 ntBASIC14.46□□□□□ -0.09
APOC1P02654 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
APOC1P02654 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.09
APOC1P02654 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.46□□□□□ -0.09
APOC1P02654 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.46□□□□□ -0.09
APOC1P02654 AC006449.6-201ENST00000612330 2296 ntBASIC14.46□□□□□ -0.09
APOC1P02654 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC1P02654 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.46□□□□□ -0.09
APOC1P02654 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
APOC1P02654 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC1P02654 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.46□□□□□ -0.1
APOC1P02654 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.46□□□□□ -0.1
APOC1P02654 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
APOC1P02654 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
APOC1P02654 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
APOC1P02654 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
APOC1P02654 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
APOC1P02654 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.46□□□□□ -0.1
APOC1P02654 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
APOC1P02654 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
APOC1P02654 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC1P02654 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
APOC1P02654 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC1P02654 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC1P02654 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.45□□□□□ -0.1
APOC1P02654 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.45□□□□□ -0.1
APOC1P02654 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
APOC1P02654 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC1P02654 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms