Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFNB1P01574 AL161772.1-201ENST00000610494 4412 ntBASIC16.9■□□□□ 0.3
IFNB1P01574 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.9■□□□□ 0.3
IFNB1P01574 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
IFNB1P01574 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFNB1P01574 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFNB1P01574 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.9■□□□□ 0.3
IFNB1P01574 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.9■□□□□ 0.3
IFNB1P01574 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFNB1P01574 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
IFNB1P01574 PRSS29P-201ENST00000440800 595 ntBASIC16.9■□□□□ 0.3
IFNB1P01574 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
IFNB1P01574 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.9■□□□□ 0.3
IFNB1P01574 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
IFNB1P01574 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.9■□□□□ 0.3
IFNB1P01574 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.9■□□□□ 0.3
IFNB1P01574 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
IFNB1P01574 AC021097.1-201ENST00000607902 574 ntBASIC16.9■□□□□ 0.3
IFNB1P01574 AL773604.1-201ENST00000617417 272 ntBASIC16.9■□□□□ 0.3
IFNB1P01574 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IFNB1P01574 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
IFNB1P01574 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IFNB1P01574 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFNB1P01574 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IFNB1P01574 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
IFNB1P01574 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
IFNB1P01574 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFNB1P01574 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IFNB1P01574 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.9■□□□□ 0.3
IFNB1P01574 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.9■□□□□ 0.3
IFNB1P01574 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFNB1P01574 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IFNB1P01574 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
IFNB1P01574 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.89■□□□□ 0.3
IFNB1P01574 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.89■□□□□ 0.3
IFNB1P01574 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.89■□□□□ 0.3
IFNB1P01574 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
IFNB1P01574 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
IFNB1P01574 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
IFNB1P01574 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.89■□□□□ 0.29
IFNB1P01574 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.89■□□□□ 0.29
IFNB1P01574 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
IFNB1P01574 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.89■□□□□ 0.29
IFNB1P01574 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
IFNB1P01574 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.89■□□□□ 0.29
IFNB1P01574 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 DBET-201ENST00000630918 3363 ntBASIC16.89■□□□□ 0.29
IFNB1P01574 AC004870.1-201ENST00000315132 882 ntBASIC16.89■□□□□ 0.29
IFNB1P01574 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.89■□□□□ 0.29
IFNB1P01574 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
IFNB1P01574 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
IFNB1P01574 AL031008.1-201ENST00000619963 541 ntBASIC16.89■□□□□ 0.29
IFNB1P01574 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 AP005117.1-202ENST00000581724 1908 ntBASIC16.89■□□□□ 0.29
IFNB1P01574 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 AL592424.1-201ENST00000563624 1536 ntBASIC16.89■□□□□ 0.29
IFNB1P01574 AL596257.1-201ENST00000641463 2694 ntBASIC16.89■□□□□ 0.29
IFNB1P01574 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IFNB1P01574 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
IFNB1P01574 AC112504.1-201ENST00000623415 1841 ntBASIC16.89■□□□□ 0.29
IFNB1P01574 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.89■□□□□ 0.29
IFNB1P01574 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
IFNB1P01574 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IFNB1P01574 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
IFNB1P01574 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
IFNB1P01574 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
IFNB1P01574 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IFNB1P01574 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IFNB1P01574 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IFNB1P01574 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
IFNB1P01574 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IFNB1P01574 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.88■□□□□ 0.29
IFNB1P01574 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.88■□□□□ 0.29
IFNB1P01574 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IFNB1P01574 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
IFNB1P01574 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IFNB1P01574 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.88■□□□□ 0.29
IFNB1P01574 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.88■□□□□ 0.29
IFNB1P01574 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.88■□□□□ 0.29
IFNB1P01574 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.88■□□□□ 0.29
IFNB1P01574 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IFNB1P01574 AL031284.1-201ENST00000419297 478 ntBASIC16.88■□□□□ 0.29
IFNB1P01574 AC098831.1-202ENST00000438821 336 ntBASIC16.88■□□□□ 0.29
IFNB1P01574 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms