Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.15■□□□□ 0.18
PDGFBP01127 FAM197Y7-201ENST00000432892 766 ntBASIC16.15■□□□□ 0.18
PDGFBP01127 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.15■□□□□ 0.18
PDGFBP01127 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.15■□□□□ 0.18
PDGFBP01127 TARDBPP1-201ENST00000442013 1203 ntBASIC16.15■□□□□ 0.18
PDGFBP01127 RN7SL769P-201ENST00000469386 295 ntBASIC16.15■□□□□ 0.18
PDGFBP01127 RPL13AP25-201ENST00000484130 612 ntBASIC16.15■□□□□ 0.18
PDGFBP01127 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.15■□□□□ 0.18
PDGFBP01127 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.15■□□□□ 0.18
PDGFBP01127 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PDGFBP01127 AC078819.1-201ENST00000547454 765 ntBASIC16.15■□□□□ 0.18
PDGFBP01127 AC012085.1-201ENST00000548270 765 ntBASIC16.15■□□□□ 0.18
PDGFBP01127 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
PDGFBP01127 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PDGFBP01127 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.15■□□□□ 0.18
PDGFBP01127 MIR7845-201ENST00000618396 99 ntBASIC16.15■□□□□ 0.18
PDGFBP01127 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PDGFBP01127 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 AC004408.2-201ENST00000623613 2777 ntBASIC16.15■□□□□ 0.18
PDGFBP01127 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.15■□□□□ 0.18
PDGFBP01127 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PDGFBP01127 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PDGFBP01127 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFBP01127 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFBP01127 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.14■□□□□ 0.17
PDGFBP01127 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PDGFBP01127 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFBP01127 KRT8P37-201ENST00000451609 1420 ntBASIC16.14■□□□□ 0.17
PDGFBP01127 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.14■□□□□ 0.17
PDGFBP01127 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFBP01127 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFBP01127 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFBP01127 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.14■□□□□ 0.17
PDGFBP01127 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.14■□□□□ 0.17
PDGFBP01127 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.14■□□□□ 0.17
PDGFBP01127 TMEM198B-204ENST00000484016 896 ntBASIC16.14■□□□□ 0.17
PDGFBP01127 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.14■□□□□ 0.17
PDGFBP01127 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.14■□□□□ 0.17
PDGFBP01127 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.14■□□□□ 0.17
PDGFBP01127 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.14■□□□□ 0.17
PDGFBP01127 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.14■□□□□ 0.17
PDGFBP01127 AC138627.1-207ENST00000641560 1006 ntBASIC16.14■□□□□ 0.17
PDGFBP01127 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFBP01127 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFBP01127 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFBP01127 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
PDGFBP01127 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PDGFBP01127 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFBP01127 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFBP01127 AL391256.1-201ENST00000443260 1855 ntBASIC16.14■□□□□ 0.17
PDGFBP01127 U82695.1-201ENST00000635752 1889 ntBASIC16.14■□□□□ 0.17
PDGFBP01127 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDGFBP01127 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.14■□□□□ 0.17
PDGFBP01127 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.14■□□□□ 0.17
PDGFBP01127 AC018735.1-201ENST00000437208 1502 ntBASIC16.14■□□□□ 0.17
PDGFBP01127 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PDGFBP01127 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.14■□□□□ 0.17
PDGFBP01127 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFBP01127 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFBP01127 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFBP01127 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFBP01127 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFBP01127 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFBP01127 BX323043.1-201ENST00000641006 1765 ntBASIC16.13■□□□□ 0.17
PDGFBP01127 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFBP01127 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
PDGFBP01127 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFBP01127 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFBP01127 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFBP01127 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PDGFBP01127 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PDGFBP01127 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.13■□□□□ 0.17
PDGFBP01127 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFBP01127 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFBP01127 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PDGFBP01127 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.13■□□□□ 0.17
PDGFBP01127 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.13■□□□□ 0.17
PDGFBP01127 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PDGFBP01127 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.13■□□□□ 0.17
PDGFBP01127 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.13■□□□□ 0.17
PDGFBP01127 MTX1P1-201ENST00000440904 838 ntBASIC16.13■□□□□ 0.17
PDGFBP01127 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.13■□□□□ 0.17
PDGFBP01127 RPSAP36-202ENST00000494591 1261 ntBASIC16.13■□□□□ 0.17
PDGFBP01127 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.13■□□□□ 0.17
PDGFBP01127 HNRNPUP1-201ENST00000554987 333 ntBASIC16.13■□□□□ 0.17
PDGFBP01127 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.13■□□□□ 0.17
PDGFBP01127 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PDGFBP01127 MIR4321-201ENST00000592276 80 ntBASIC16.13■□□□□ 0.17
PDGFBP01127 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFBP01127 AC097724.1-201ENST00000609581 426 ntBASIC16.13■□□□□ 0.17
PDGFBP01127 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PDGFBP01127 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFBP01127 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDGFBP01127 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms