Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RAPGEF3O95398 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC23.93■■□□□ 1.42
RAPGEF3O95398 CD276-203ENST00000537340 2439 ntTSL 2 BASIC23.93■■□□□ 1.42
RAPGEF3O95398 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 AMT-206ENST00000458307 1860 ntTSL 2 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 AP001582.1-201ENST00000525856 295 ntBASIC23.92■■□□□ 1.42
RAPGEF3O95398 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 AC243562.2-201ENST00000561247 970 ntBASIC23.92■■□□□ 1.42
RAPGEF3O95398 NAT9-222ENST00000583476 583 ntTSL 3 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAPGEF3O95398 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
RAPGEF3O95398 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAPGEF3O95398 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RAPGEF3O95398 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAPGEF3O95398 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RAPGEF3O95398 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAPGEF3O95398 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAPGEF3O95398 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RAPGEF3O95398 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RAPGEF3O95398 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 AC018635.2-201ENST00000608625 364 ntBASIC23.91■■□□□ 1.42
RAPGEF3O95398 AP001505.2-201ENST00000616815 443 ntBASIC23.91■■□□□ 1.42
RAPGEF3O95398 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC23.91■■□□□ 1.42
RAPGEF3O95398 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
RAPGEF3O95398 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RAPGEF3O95398 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC23.9■■□□□ 1.42
RAPGEF3O95398 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC23.9■■□□□ 1.42
RAPGEF3O95398 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
RAPGEF3O95398 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
RAPGEF3O95398 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC23.9■■□□□ 1.42
RAPGEF3O95398 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RAPGEF3O95398 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC23.9■■□□□ 1.42
RAPGEF3O95398 SPTLC1P5-201ENST00000450718 252 ntBASIC23.9■■□□□ 1.42
RAPGEF3O95398 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RAPGEF3O95398 AC126915.1-201ENST00000522847 1038 ntBASIC23.9■■□□□ 1.42
RAPGEF3O95398 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RAPGEF3O95398 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC23.9■■□□□ 1.42
RAPGEF3O95398 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC23.9■■□□□ 1.42
RAPGEF3O95398 AC132938.4-201ENST00000623835 848 ntBASIC23.9■■□□□ 1.42
RAPGEF3O95398 AC006453.4-201ENST00000636949 1252 ntBASIC23.9■■□□□ 1.42
RAPGEF3O95398 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC23.9■■□□□ 1.42
RAPGEF3O95398 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC23.9■■□□□ 1.42
RAPGEF3O95398 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
RAPGEF3O95398 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
RAPGEF3O95398 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC23.9■■□□□ 1.42
RAPGEF3O95398 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
RAPGEF3O95398 AC067852.2-201ENST00000590513 2313 ntBASIC23.89■■□□□ 1.42
RAPGEF3O95398 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RAPGEF3O95398 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RAPGEF3O95398 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RAPGEF3O95398 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
RAPGEF3O95398 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC23.89■■□□□ 1.42
RAPGEF3O95398 SDCCAG3P2-201ENST00000326105 1023 ntBASIC23.89■■□□□ 1.41
RAPGEF3O95398 PGGT1BP2-201ENST00000398621 1028 ntBASIC23.89■■□□□ 1.41
RAPGEF3O95398 POM121L10P-201ENST00000436994 1285 ntBASIC23.89■■□□□ 1.41
RAPGEF3O95398 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms