Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMC2O95347 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.47■□□□□ 0.55
SMC2O95347 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
SMC2O95347 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.47■□□□□ 0.55
SMC2O95347 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.47■□□□□ 0.55
SMC2O95347 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMC2O95347 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMC2O95347 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMC2O95347 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.47■□□□□ 0.55
SMC2O95347 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.47■□□□□ 0.55
SMC2O95347 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMC2O95347 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMC2O95347 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMC2O95347 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMC2O95347 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.46■□□□□ 0.55
SMC2O95347 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SMC2O95347 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMC2O95347 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMC2O95347 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMC2O95347 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.46■□□□□ 0.55
SMC2O95347 AC005622.1-201ENST00000636801 1703 ntBASIC18.46■□□□□ 0.55
SMC2O95347 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMC2O95347 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.46■□□□□ 0.55
SMC2O95347 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SMC2O95347 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
SMC2O95347 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMC2O95347 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMC2O95347 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.46■□□□□ 0.55
SMC2O95347 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMC2O95347 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMC2O95347 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.46■□□□□ 0.55
SMC2O95347 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.46■□□□□ 0.55
SMC2O95347 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.46■□□□□ 0.55
SMC2O95347 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SMC2O95347 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SMC2O95347 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
SMC2O95347 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMC2O95347 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.46■□□□□ 0.55
SMC2O95347 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
SMC2O95347 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SMC2O95347 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
SMC2O95347 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.45■□□□□ 0.54
SMC2O95347 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMC2O95347 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMC2O95347 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SMC2O95347 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMC2O95347 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.45■□□□□ 0.54
SMC2O95347 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
SMC2O95347 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.45■□□□□ 0.54
SMC2O95347 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMC2O95347 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.45■□□□□ 0.54
SMC2O95347 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SMC2O95347 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMC2O95347 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMC2O95347 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMC2O95347 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMC2O95347 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SMC2O95347 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.45■□□□□ 0.54
SMC2O95347 MIR648-201ENST00000385046 94 ntBASIC18.45■□□□□ 0.54
SMC2O95347 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.45■□□□□ 0.54
SMC2O95347 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.45■□□□□ 0.54
SMC2O95347 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.45■□□□□ 0.54
SMC2O95347 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.45■□□□□ 0.54
SMC2O95347 AL160237.2-201ENST00000556165 472 ntBASIC18.45■□□□□ 0.54
SMC2O95347 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.45■□□□□ 0.54
SMC2O95347 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
SMC2O95347 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
SMC2O95347 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMC2O95347 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMC2O95347 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMC2O95347 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMC2O95347 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SMC2O95347 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMC2O95347 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SMC2O95347 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMC2O95347 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMC2O95347 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMC2O95347 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMC2O95347 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMC2O95347 AL592424.1-201ENST00000563624 1536 ntBASIC18.44■□□□□ 0.54
SMC2O95347 AC073347.1-201ENST00000421633 2643 ntBASIC18.44■□□□□ 0.54
SMC2O95347 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMC2O95347 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMC2O95347 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMC2O95347 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.44■□□□□ 0.54
SMC2O95347 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
SMC2O95347 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.44■□□□□ 0.54
SMC2O95347 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.44■□□□□ 0.54
SMC2O95347 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMC2O95347 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SMC2O95347 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.44■□□□□ 0.54
SMC2O95347 RNU1-129P-201ENST00000384064 167 ntBASIC18.44■□□□□ 0.54
SMC2O95347 PRSS29P-201ENST00000440800 595 ntBASIC18.44■□□□□ 0.54
SMC2O95347 CXCL1P1-201ENST00000502804 216 ntBASIC18.44■□□□□ 0.54
SMC2O95347 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.44■□□□□ 0.54
SMC2O95347 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMC2O95347 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.44■□□□□ 0.54
SMC2O95347 U1.21-201ENST00000580816 167 ntBASIC18.44■□□□□ 0.54
SMC2O95347 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMC2O95347 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms