Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF2O60811 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PRAMEF2O60811 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF2O60811 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF2O60811 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF2O60811 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF2O60811 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF2O60811 AC073439.1-201ENST00000624121 1774 ntBASIC15.31■□□□□ 0.04
PRAMEF2O60811 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF2O60811 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF2O60811 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF2O60811 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF2O60811 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF2O60811 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF2O60811 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF2O60811 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF2O60811 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF2O60811 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PRAMEF2O60811 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEF2O60811 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
PRAMEF2O60811 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
PRAMEF2O60811 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEF2O60811 TUBB3P1-201ENST00000405796 1332 ntBASIC15.3■□□□□ 0.04
PRAMEF2O60811 PCDH8P1-201ENST00000428983 2773 ntBASIC15.3■□□□□ 0.04
PRAMEF2O60811 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEF2O60811 AC093724.1-201ENST00000448659 1027 ntBASIC15.3■□□□□ 0.04
PRAMEF2O60811 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEF2O60811 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEF2O60811 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PRAMEF2O60811 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PRAMEF2O60811 DUX4L27-201ENST00000554796 1261 ntBASIC15.3■□□□□ 0.04
PRAMEF2O60811 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEF2O60811 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEF2O60811 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEF2O60811 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEF2O60811 AC008267.7-201ENST00000624570 1194 ntBASIC15.3■□□□□ 0.04
PRAMEF2O60811 AC005622.1-201ENST00000636801 1703 ntBASIC15.3■□□□□ 0.04
PRAMEF2O60811 AC084121.4-201ENST00000641598 221 ntBASIC15.3■□□□□ 0.04
PRAMEF2O60811 AF228730.8-201ENST00000642140 221 ntBASIC15.3■□□□□ 0.04
PRAMEF2O60811 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF2O60811 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF2O60811 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 AC006449.5-201ENST00000610658 2098 ntBASIC15.29■□□□□ 0.04
PRAMEF2O60811 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF2O60811 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF2O60811 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF2O60811 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF2O60811 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF2O60811 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF2O60811 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF2O60811 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF2O60811 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 SPDYE7P-202ENST00000420373 878 ntBASIC15.29■□□□□ 0.04
PRAMEF2O60811 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 KLF2P3-201ENST00000451977 1087 ntBASIC15.29■□□□□ 0.04
PRAMEF2O60811 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF2O60811 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF2O60811 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 AC051619.7-201ENST00000568314 623 ntBASIC15.29■□□□□ 0.04
PRAMEF2O60811 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 AC027307.2-201ENST00000591252 911 ntBASIC15.29■□□□□ 0.04
PRAMEF2O60811 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.29■□□□□ 0.04
PRAMEF2O60811 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF2O60811 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms