Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SSSCA1O60232 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSSCA1O60232 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.35□□□□□ -0.27
SSSCA1O60232 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
SSSCA1O60232 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.34□□□□□ -0.27
SSSCA1O60232 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SSSCA1O60232 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SSSCA1O60232 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SSSCA1O60232 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
SSSCA1O60232 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SSSCA1O60232 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 SIGLEC16-201ENST00000599858 1437 ntBASIC13.34□□□□□ -0.27
SSSCA1O60232 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SSSCA1O60232 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.34□□□□□ -0.27
SSSCA1O60232 KRT18P57-201ENST00000443599 1254 ntBASIC13.34□□□□□ -0.27
SSSCA1O60232 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SSSCA1O60232 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.34□□□□□ -0.27
SSSCA1O60232 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.34□□□□□ -0.27
SSSCA1O60232 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SSSCA1O60232 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.34□□□□□ -0.27
SSSCA1O60232 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.34□□□□□ -0.27
SSSCA1O60232 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 AC010654.1-201ENST00000615722 808 ntBASIC13.34□□□□□ -0.27
SSSCA1O60232 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.34□□□□□ -0.27
SSSCA1O60232 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.34□□□□□ -0.27
SSSCA1O60232 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSSCA1O60232 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.34□□□□□ -0.27
SSSCA1O60232 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSSCA1O60232 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSSCA1O60232 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSSCA1O60232 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.33□□□□□ -0.27
SSSCA1O60232 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 AC073508.3-201ENST00000619697 1419 ntBASIC13.33□□□□□ -0.28
SSSCA1O60232 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.33□□□□□ -0.28
SSSCA1O60232 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.33□□□□□ -0.28
SSSCA1O60232 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.33□□□□□ -0.28
SSSCA1O60232 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.33□□□□□ -0.28
SSSCA1O60232 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.33□□□□□ -0.28
SSSCA1O60232 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.33□□□□□ -0.28
SSSCA1O60232 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
SSSCA1O60232 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.33□□□□□ -0.28
SSSCA1O60232 AL353135.1-201ENST00000606729 504 ntBASIC13.33□□□□□ -0.28
SSSCA1O60232 AC006011.2-201ENST00000621313 1158 ntBASIC13.33□□□□□ -0.28
SSSCA1O60232 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.33□□□□□ -0.28
SSSCA1O60232 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.33□□□□□ -0.28
SSSCA1O60232 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.33□□□□□ -0.28
SSSCA1O60232 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SSSCA1O60232 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 AC020658.6-201ENST00000623564 1870 ntBASIC13.33□□□□□ -0.28
SSSCA1O60232 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SSSCA1O60232 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.33□□□□□ -0.28
SSSCA1O60232 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms