Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 UPF3AP3-201ENST00000420996 769 ntBASIC14.51□□□□□ -0.09
TRAF3IP2O43734 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 AC245100.5-201ENST00000452108 331 ntBASIC14.51□□□□□ -0.09
TRAF3IP2O43734 AC069335.1-201ENST00000489972 472 ntBASIC14.51□□□□□ -0.09
TRAF3IP2O43734 AC098859.1-201ENST00000502915 1238 ntBASIC14.51□□□□□ -0.09
TRAF3IP2O43734 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 KRT8P23-201ENST00000560090 1207 ntBASIC14.51□□□□□ -0.09
TRAF3IP2O43734 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 AC022145.2-201ENST00000598203 171 ntBASIC14.51□□□□□ -0.09
TRAF3IP2O43734 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 AC105339.1-204ENST00000636249 355 ntBASIC14.51□□□□□ -0.09
TRAF3IP2O43734 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 AC007326.2-201ENST00000624224 7579 ntBASIC14.51□□□□□ -0.09
TRAF3IP2O43734 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
TRAF3IP2O43734 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 MIR346-201ENST00000362234 95 ntBASIC14.5□□□□□ -0.09
TRAF3IP2O43734 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 AC112482.1-201ENST00000492080 688 ntBASIC14.5□□□□□ -0.09
TRAF3IP2O43734 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 MIR3687-2-201ENST00000577708 61 ntBASIC14.5□□□□□ -0.09
TRAF3IP2O43734 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 MIR4321-201ENST00000592276 80 ntBASIC14.5□□□□□ -0.09
TRAF3IP2O43734 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 MIR3687-1-201ENST00000614492 61 ntBASIC14.5□□□□□ -0.09
TRAF3IP2O43734 SPTSSB-204ENST00000617024 1292 ntBASIC14.5□□□□□ -0.09
TRAF3IP2O43734 AL513210.1-201ENST00000629608 234 ntBASIC14.5□□□□□ -0.09
TRAF3IP2O43734 AC084121.4-201ENST00000641598 221 ntBASIC14.5□□□□□ -0.09
TRAF3IP2O43734 AF228730.8-201ENST00000642140 221 ntBASIC14.5□□□□□ -0.09
TRAF3IP2O43734 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAF3IP2O43734 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms