Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNRC18O15417 AC004554.1-201ENST00000422830 1468 ntBASIC17.17■□□□□ 0.34
TNRC18O15417 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNRC18O15417 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TNRC18O15417 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNRC18O15417 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNRC18O15417 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.17■□□□□ 0.34
TNRC18O15417 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.17■□□□□ 0.34
TNRC18O15417 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.17■□□□□ 0.34
TNRC18O15417 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNRC18O15417 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNRC18O15417 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNRC18O15417 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNRC18O15417 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNRC18O15417 AC093525.9-201ENST00000624961 1746 ntBASIC17.17■□□□□ 0.34
TNRC18O15417 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.17■□□□□ 0.34
TNRC18O15417 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.17■□□□□ 0.34
TNRC18O15417 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC17.17■□□□□ 0.34
TNRC18O15417 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TNRC18O15417 MIR6125-201ENST00000618986 96 ntBASIC17.17■□□□□ 0.34
TNRC18O15417 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNRC18O15417 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TNRC18O15417 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNRC18O15417 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
TNRC18O15417 AC012317.2-201ENST00000623305 2251 ntBASIC17.17■□□□□ 0.34
TNRC18O15417 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNRC18O15417 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNRC18O15417 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.17■□□□□ 0.34
TNRC18O15417 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNRC18O15417 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TNRC18O15417 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.16■□□□□ 0.34
TNRC18O15417 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNRC18O15417 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNRC18O15417 KRT18P25-201ENST00000508931 1278 ntBASIC17.16■□□□□ 0.34
TNRC18O15417 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
TNRC18O15417 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNRC18O15417 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNRC18O15417 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNRC18O15417 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNRC18O15417 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.16■□□□□ 0.34
TNRC18O15417 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNRC18O15417 IGKV1OR-2-201ENST00000457995 350 ntBASIC17.16■□□□□ 0.34
TNRC18O15417 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.16■□□□□ 0.34
TNRC18O15417 AC020931.1-201ENST00000589622 1346 ntBASIC17.16■□□□□ 0.34
TNRC18O15417 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNRC18O15417 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNRC18O15417 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.16■□□□□ 0.34
TNRC18O15417 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNRC18O15417 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.16■□□□□ 0.34
TNRC18O15417 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNRC18O15417 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNRC18O15417 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.16■□□□□ 0.34
TNRC18O15417 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.16■□□□□ 0.34
TNRC18O15417 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNRC18O15417 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNRC18O15417 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.16■□□□□ 0.34
TNRC18O15417 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNRC18O15417 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TNRC18O15417 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.16■□□□□ 0.34
TNRC18O15417 AC068587.8-201ENST00000641239 219 ntBASIC17.16■□□□□ 0.34
TNRC18O15417 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNRC18O15417 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TNRC18O15417 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.15■□□□□ 0.34
TNRC18O15417 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNRC18O15417 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNRC18O15417 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNRC18O15417 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNRC18O15417 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNRC18O15417 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNRC18O15417 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNRC18O15417 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.15■□□□□ 0.34
TNRC18O15417 RN7SL67P-201ENST00000492147 296 ntBASIC17.15■□□□□ 0.34
TNRC18O15417 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.15■□□□□ 0.34
TNRC18O15417 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.15■□□□□ 0.34
TNRC18O15417 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.15■□□□□ 0.34
TNRC18O15417 THY1-209ENST00000580275 578 ntTSL 3 BASIC17.15■□□□□ 0.34
TNRC18O15417 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.15■□□□□ 0.34
TNRC18O15417 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.15■□□□□ 0.34
TNRC18O15417 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.15■□□□□ 0.34
TNRC18O15417 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TNRC18O15417 LINC01451-201ENST00000623792 534 ntBASIC17.15■□□□□ 0.34
TNRC18O15417 AC004923.1-202ENST00000642106 209 ntBASIC17.15■□□□□ 0.34
TNRC18O15417 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNRC18O15417 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNRC18O15417 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TNRC18O15417 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNRC18O15417 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNRC18O15417 RN7SKP214-201ENST00000364208 315 ntBASIC17.15■□□□□ 0.34
TNRC18O15417 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TNRC18O15417 AC023141.7-201ENST00000430646 407 ntBASIC17.15■□□□□ 0.34
TNRC18O15417 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNRC18O15417 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.15■□□□□ 0.34
TNRC18O15417 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.15■□□□□ 0.34
TNRC18O15417 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNRC18O15417 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.15■□□□□ 0.34
TNRC18O15417 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TNRC18O15417 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TNRC18O15417 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
TNRC18O15417 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.14■□□□□ 0.34
TNRC18O15417 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms