Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC099336.1-202ENST00000602961 463 ntBASIC11.2□□□□□ -0.62
NDUFA1O15239 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
NDUFA1O15239 AP000550.4-202ENST00000639755 178 ntBASIC11.2□□□□□ -0.62
NDUFA1O15239 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
NDUFA1O15239 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 MYO15B-237ENST00000642007 4893 ntBASIC11.2□□□□□ -0.62
NDUFA1O15239 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
NDUFA1O15239 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC11.2□□□□□ -0.62
NDUFA1O15239 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
NDUFA1O15239 LINC01144-201ENST00000626198 1710 ntBASIC11.2□□□□□ -0.62
NDUFA1O15239 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 SSR4P1-203ENST00000599569 2260 ntBASIC11.2□□□□□ -0.62
NDUFA1O15239 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 HNRNPRP1-201ENST00000453465 1695 ntBASIC11.2□□□□□ -0.62
NDUFA1O15239 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.2□□□□□ -0.62
NDUFA1O15239 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
NDUFA1O15239 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
NDUFA1O15239 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
NDUFA1O15239 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
NDUFA1O15239 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
NDUFA1O15239 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.19□□□□□ -0.62
NDUFA1O15239 POLL-217ENST00000628479 1953 ntTSL 5 BASIC11.19□□□□□ -0.62
NDUFA1O15239 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 DKFZP434H168-201ENST00000567381 1905 ntBASIC11.19□□□□□ -0.62
NDUFA1O15239 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.19□□□□□ -0.62
NDUFA1O15239 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC11.19□□□□□ -0.62
NDUFA1O15239 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC11.19□□□□□ -0.62
NDUFA1O15239 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC11.19□□□□□ -0.62
NDUFA1O15239 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 AP002383.4-201ENST00000442518 975 ntBASIC11.19□□□□□ -0.62
NDUFA1O15239 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.19□□□□□ -0.62
NDUFA1O15239 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.19□□□□□ -0.62
NDUFA1O15239 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
NDUFA1O15239 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 AL591684.3-201ENST00000605187 298 ntBASIC11.19□□□□□ -0.62
NDUFA1O15239 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.19□□□□□ -0.62
NDUFA1O15239 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.19□□□□□ -0.62
NDUFA1O15239 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.19□□□□□ -0.62
NDUFA1O15239 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
NDUFA1O15239 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
NDUFA1O15239 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
NDUFA1O15239 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
NDUFA1O15239 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC11.19□□□□□ -0.62
NDUFA1O15239 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC11.19□□□□□ -0.62
NDUFA1O15239 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
NDUFA1O15239 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC11.19□□□□□ -0.62
NDUFA1O15239 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
NDUFA1O15239 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NDUFA1O15239 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.18□□□□□ -0.62
NDUFA1O15239 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NDUFA1O15239 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
NDUFA1O15239 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
NDUFA1O15239 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NDUFA1O15239 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.18□□□□□ -0.62
NDUFA1O15239 AL512652.2-201ENST00000625156 1716 ntBASIC11.18□□□□□ -0.62
NDUFA1O15239 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
NDUFA1O15239 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.18□□□□□ -0.62
NDUFA1O15239 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
NDUFA1O15239 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NDUFA1O15239 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
NDUFA1O15239 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
NDUFA1O15239 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC11.18□□□□□ -0.62
NDUFA1O15239 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NDUFA1O15239 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NDUFA1O15239 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
NDUFA1O15239 AC079776.2-201ENST00000641154 1609 ntBASIC11.18□□□□□ -0.62
NDUFA1O15239 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC11.18□□□□□ -0.62
NDUFA1O15239 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms