Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PFDN6O15212 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.37■□□□□ 0.21
PFDN6O15212 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
PFDN6O15212 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PFDN6O15212 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.37■□□□□ 0.21
PFDN6O15212 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.37■□□□□ 0.21
PFDN6O15212 AL596087.1-201ENST00000400979 1969 ntBASIC16.37■□□□□ 0.21
PFDN6O15212 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
PFDN6O15212 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PFDN6O15212 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.37■□□□□ 0.21
PFDN6O15212 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PFDN6O15212 AC112191.1-201ENST00000523689 701 ntBASIC16.37■□□□□ 0.21
PFDN6O15212 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
PFDN6O15212 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PFDN6O15212 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.37■□□□□ 0.21
PFDN6O15212 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.37■□□□□ 0.21
PFDN6O15212 AC106730.1-201ENST00000566722 1090 ntBASIC16.37■□□□□ 0.21
PFDN6O15212 AC018845.2-201ENST00000568326 409 ntBASIC16.37■□□□□ 0.21
PFDN6O15212 AL078644.1-201ENST00000609881 752 ntBASIC16.37■□□□□ 0.21
PFDN6O15212 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PFDN6O15212 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.37■□□□□ 0.21
PFDN6O15212 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PFDN6O15212 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PFDN6O15212 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.37■□□□□ 0.21
PFDN6O15212 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PFDN6O15212 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.37■□□□□ 0.21
PFDN6O15212 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PFDN6O15212 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PFDN6O15212 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN6O15212 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.36■□□□□ 0.21
PFDN6O15212 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PFDN6O15212 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
PFDN6O15212 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 REXO1L8P-201ENST00000604378 1897 ntBASIC16.36■□□□□ 0.21
PFDN6O15212 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 KRT18P3-201ENST00000451602 1288 ntBASIC16.36■□□□□ 0.21
PFDN6O15212 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.36■□□□□ 0.21
PFDN6O15212 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 PDPK2P-202ENST00000562415 1191 ntBASIC16.36■□□□□ 0.21
PFDN6O15212 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.36■□□□□ 0.21
PFDN6O15212 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 AL121894.2-201ENST00000602977 491 ntBASIC16.36■□□□□ 0.21
PFDN6O15212 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.36■□□□□ 0.21
PFDN6O15212 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
PFDN6O15212 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
PFDN6O15212 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
PFDN6O15212 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.36■□□□□ 0.21
PFDN6O15212 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN6O15212 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN6O15212 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PFDN6O15212 AL136379.1-201ENST00000623471 2642 ntBASIC16.35■□□□□ 0.21
PFDN6O15212 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN6O15212 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PFDN6O15212 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.35■□□□□ 0.21
PFDN6O15212 AL592424.1-201ENST00000563624 1536 ntBASIC16.35■□□□□ 0.21
PFDN6O15212 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms