Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 AL512652.2-201ENST00000625156 1716 ntBASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 AC084018.2-201ENST00000613093 2607 ntBASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 AC073439.1-201ENST00000624121 1774 ntBASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 AC236430.1-201ENST00000402231 743 ntBASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 AL031731.1-201ENST00000642131 2094 ntBASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPA2E9PIF3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.83□□□□□ -0.03
NPIPA2E9PIF3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA2E9PIF3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
NPIPA2E9PIF3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA2E9PIF3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA2E9PIF3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA2E9PIF3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
NPIPA2E9PIF3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPA2E9PIF3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 UGT1A2P-201ENST00000454886 866 ntBASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 AC027369.6-201ENST00000525520 931 ntBASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPA2E9PIF3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms